MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:105176009-105516222

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Plpp3	4	105157347 to 105232764	75417	+	protein coding gene	phospholipid phosphatase 3
Tssr38157	4	105193116 to 105193120	4	+	TSS region	transcription start site region 38157
6030451C04Rik	4	105200735 to 105201912	1177		unclassified gene	RIKEN cDNA 6030451C04 gene
Tssr38158	4	105224303 to 105224315	12	+	TSS region	transcription start site region 38158
Cpgi14521	4	105245872 to 105246027	155		CpG island	CpG island 14521
Tssr38159	4	105257099 to 105257107	8	+	TSS region	transcription start site region 38159
Tssr38160	4	105258537 to 105258559	22	+	TSS region	transcription start site region 38160
Tssr38161	4	105258614 to 105258622	8	+	TSS region	transcription start site region 38161
Tssr38162	4	105261349 to 105261354	5	+	TSS region	transcription start site region 38162
Tssr38163	4	105267452 to 105267462	10	+	TSS region	transcription start site region 38163
Tssr38164	4	105267508 to 105267526	18	+	TSS region	transcription start site region 38164
Tssr42621	4	105268446 to 105268474	28	-	TSS region	transcription start site region 42621
D4Mit306	4	105299678 to 105299798	120		DNA segment	DNA Segment, Chr 4, Massachusetts Institute of Technology 306
Ath8	4	105299798 to 45658442	-59641356		QTL	atherosclerosis 8
Gm40217	4	105310378 to 105319147	8769	-	lncRNA gene	predicted gene, 40217
D4Ertd31e	4	105346009 to 105346222	213		DNA segment	DNA segment, Chr 4, ERATO Doi 31, expressed
Gm12722	4	105374454 to 105374946	492	-	pseudogene	predicted gene 12722
Gm12723	4	105511232 to 105511682	450	+	pseudogene	predicted gene 12723