Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:103153527-103973549

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mier1 4 103114390 to 103165754 51364 + protein coding gene MEIR1 treanscription regulator
Tssr38101 4 103164641 to 103164645 4 + TSS region transcription start site region 38101
Slc35d1 4 103170649 to 103215164 44515 - protein coding gene solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
Tssr38102 4 103170952 to 103170980 28 + TSS region transcription start site region 38102
Tssr42593 4 103171786 to 103171791 5 - TSS region transcription start site region 42593
Tssr42594 4 103173353 to 103173364 11 - TSS region transcription start site region 42594
Tssr42595 4 103173368 to 103173386 18 - TSS region transcription start site region 42595
Tssr42596 4 103173409 to 103173417 8 - TSS region transcription start site region 42596
Tssr42597 4 103173444 to 103173458 14 - TSS region transcription start site region 42597
Tssr42598 4 103173460 to 103173465 5 - TSS region transcription start site region 42598
Tssr42599 4 103173484 to 103173495 11 - TSS region transcription start site region 42599
Tssr42600 4 103173497 to 103173513 16 - TSS region transcription start site region 42600
Tssr42601 4 103173589 to 103173600 11 - TSS region transcription start site region 42601
Tssr42602 4 103173621 to 103173634 13 - TSS region transcription start site region 42602
Cpgi14513 4 103214129 to 103215604 1475 CpG island CpG island 14513
Tssr42603 4 103214791 to 103214818 27 - TSS region transcription start site region 42603
Tssr38103 4 103214843 to 103214865 22 + TSS region transcription start site region 38103
Tssr42604 4 103214845 to 103214856 11 - TSS region transcription start site region 42604
Gm46864 4 103214943 to 103223117 8174 + lncRNA gene predicted gene, 46864
Tssr42605 4 103215136 to 103215141 5 - TSS region transcription start site region 42605
Tssr42606 4 103215147 to 103215201 54 - TSS region transcription start site region 42606
Tssr42607 4 103215339 to 103215389 50 - TSS region transcription start site region 42607
Gm44037 4 103217702 to 103219592 1890 + lincRNA gene predicted gene, 44037
4921539E11Rik 4 103230445 to 103290863 60418 - protein coding gene RIKEN cDNA 4921539E11 gene
Tssr42608 4 103290853 to 103290870 17 - TSS region transcription start site region 42608
Tssr1249 4 103290898 to 103290906 8 - TSS region transcription start site region 1249
4930456L15Rik 4 103290959 to 103311832 20873 + lincRNA gene RIKEN cDNA 4930456L15 gene
Gm36523 4 103302836 to 103313555 10719 - lncRNA gene predicted gene, 36523
Cpgi14514 4 103313452 to 103314301 849 CpG island CpG island 14514
Tssr38104 4 103313806 to 103313820 14 + TSS region transcription start site region 38104
Oma1 4 103313812 to 103371868 58056 + protein coding gene OMA1 zinc metallopeptidase
Tssr38105 4 103313827 to 103313856 29 + TSS region transcription start site region 38105
Tssr38106 4 103314493 to 103314504 11 + TSS region transcription start site region 38106
Tssr38107 4 103324907 to 103324953 46 + TSS region transcription start site region 38107
Tssr38108 4 103339855 to 103339864 9 + TSS region transcription start site region 38108
Tssr38109 4 103348703 to 103348708 5 + TSS region transcription start site region 38109
4931409D07Rik 4 103381299 to 103382462 1163 unclassified gene RIKEN cDNA 4931409D07 gene
Gm12718 4 103382500 to 103492040 109540 + lincRNA gene predicted gene 12718
Gm23064 4 103471859 to 103471959 100 + miRNA gene predicted gene, 23064
Gm12720 4 103538845 to 103550682 11837 - unclassified non-coding RNA gene predicted gene 12720
Gm12716 4 103543374 to 103544727 1353 - pseudogene predicted gene 12716
Cpgi14515 4 103563139 to 103563404 265 CpG island CpG island 14515
Tssr38110 4 103563323 to 103563331 8 + TSS region transcription start site region 38110
Gm12715 4 103563402 to 103564529 1127 + pseudogene predicted gene 12715
Tssr38111 4 103563527 to 103563549 22 + TSS region transcription start site region 38111
Gm22801 4 103564203 to 103564286 83 + miRNA gene predicted gene, 22801
Gm25877 4 103586272 to 103586400 128 - snoRNA gene predicted gene, 25877
Gm36604 4 103610421 to 103619145 8724 - lncRNA gene predicted gene, 36604
Tssr38112 4 103619225 to 103619244 19 + TSS region transcription start site region 38112
Cpgi14516 4 103619342 to 103620341 999 CpG island CpG island 14516
Tssr38113 4 103619487 to 103619520 33 + TSS region transcription start site region 38113
Tssr38114 4 103619521 to 103619553 32 + TSS region transcription start site region 38114
Dab1 4 103619546 to 104744844 1125298 + protein coding gene disabled 1
Tssr38115 4 103619580 to 103619592 12 + TSS region transcription start site region 38115
Tssr38116 4 103676806 to 103676811 5 + TSS region transcription start site region 38116
Tssr38117 4 103685760 to 103685765 5 + TSS region transcription start site region 38117
2900034C19Rik 4 103711658 to 103712898 1240 unclassified gene RIKEN cDNA 2900034C19 gene
Tssr38118 4 103804862 to 103804864 2 + TSS region transcription start site region 38118
Tssr38119 4 103851432 to 103851448 16 + TSS region transcription start site region 38119
D4Mit331 4 103903196 to 103903321 125 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 331
Gm12719 4 103939301 to 103939541 240 - pseudogene predicted gene 12719
Gm12717 4 103941323 to 103942120 797 + pseudogene predicted gene 12717