Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:99120618-99241230

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm24216 3 99124186 to 99124302 116 - snoRNA gene predicted gene, 24216
Wars2 3 99140618 to 99221230 80612 + protein coding gene tryptophanyl tRNA synthetase 2 (mitochondrial)
Cpgi13608 3 99140878 to 99141761 883 CpG island CpG island 13608
Tssr30855 3 99141063 to 99141072 9 + TSS region transcription start site region 30855
Tssr30856 3 99141081 to 99141103 22 + TSS region transcription start site region 30856
Gm43024 3 99144603 to 99148954 4351 + sense intronic lncRNA gene predicted gene 43024
Gm18982 3 99180753 to 99181281 528 - pseudogene predicted gene, 18982
Mir6481 3 99199344 to 99199453 109 - miRNA gene microRNA 6481
Gm42717 3 99206422 to 99209884 3462 + sense intronic lncRNA gene predicted gene 42717
Cpgi13609 3 99235055 to 99235390 335 CpG island CpG island 13609
Gm38468 3 99236908 to 99239123 2215 + lncRNA gene predicted gene, 38468
D3Mit10 3 99239727 to 99239868 141 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 10
Iba2 3 99239727 to 99239868 141 QTL induction of brown adipocytes 2
Tssr30857 3 99240328 to 99240337 9 + TSS region transcription start site region 30857
Tssr30858 3 99240361 to 99240385 24 + TSS region transcription start site region 30858
Tbx15 3 99240381 to 99354259 113878 + protein coding gene T-box 15
Gm46817 3 99240655 to 99241895 1240 - lncRNA gene predicted gene, 46817
Cpgi13610 3 99240794 to 99241599 805 CpG island CpG island 13610