Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:98089966-98291102

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Notch2 3 98013538 to 98150367 136829 + protein coding gene notch 2
Tssr30817 3 98109199 to 98109218 19 + TSS region transcription start site region 30817
Tssr30818 3 98114358 to 98114377 19 + TSS region transcription start site region 30818
Gm42820 3 98121588 to 98124650 3062 + unclassified gene predicted gene 42820
Tssr30819 3 98127009 to 98127031 22 + TSS region transcription start site region 30819
Tssr30820 3 98127092 to 98127117 25 + TSS region transcription start site region 30820
Tssr30821 3 98146450 to 98146480 30 + TSS region transcription start site region 30821
Tssr30822 3 98147167 to 98147178 11 + TSS region transcription start site region 30822
Tssr30823 3 98149082 to 98149109 27 + TSS region transcription start site region 30823
Tssr30824 3 98149803 to 98149805 2 + TSS region transcription start site region 30824
Tssr30825 3 98149855 to 98149876 21 + TSS region transcription start site region 30825
Tssr30826 3 98160623 to 98160639 16 + TSS region transcription start site region 30826
Adam30 3 98160634 to 98164169 3535 + protein coding gene a disintegrin and metallopeptidase domain 30
Tssr30827 3 98160640 to 98160651 11 + TSS region transcription start site region 30827
Pcfm3 3 98177336 to 98177481 145 QTL periosteal circumference and femur length 3
D3Mit213 3 98177336 to 98177481 145 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 213
Gm9771 3 98189966 to 98191102 1136 - pseudogene predicted gene 9771
Gm40104 3 98202347 to 98206760 4413 + lncRNA gene predicted gene, 40104
Tssr976 3 98221753 to 98221756 3 + TSS region transcription start site region 976
Tssr30828 3 98222148 to 98222164 16 + TSS region transcription start site region 30828
Reg4 3 98222156 to 98236748 14592 + protein coding gene regenerating islet-derived family, member 4
Cpgi13602 3 98222269 to 98222438 169 CpG island CpG island 13602
Gm42821 3 98248599 to 98249087 488 + pseudogene predicted gene 42821
Tssr30829 3 98279930 to 98279952 22 + TSS region transcription start site region 30829
Tssr30830 3 98280030 to 98280036 6 + TSS region transcription start site region 30830
Tssr30831 3 98280427 to 98280444 17 + TSS region transcription start site region 30831
Hmgcs2 3 98280435 to 98310738 30303 + protein coding gene 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2
Tssr30832 3 98281475 to 98281492 17 + TSS region transcription start site region 30832
Gm43189 3 98286988 to 98290056 3068 + sense intronic lncRNA gene predicted gene 43189
Tssr30833 3 98287007 to 98287008 1 + TSS region transcription start site region 30833
Tssr30834 3 98290891 to 98290907 16 + TSS region transcription start site region 30834