Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:97888007-98139283

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pde4dip 3 97689828 to 97888707 198879 - protein coding gene phosphodiesterase 4D interacting protein (myomegalin)
Cpgi13598 3 97888175 to 97888910 735 CpG island CpG island 13598
Tssr34685 3 97888628 to 97888647 19 - TSS region transcription start site region 34685
Tssr34686 3 97888686 to 97888819 133 - TSS region transcription start site region 34686
Tssr34687 3 97888827 to 97888845 18 - TSS region transcription start site region 34687
Tssr34688 3 97888911 to 97888929 18 - TSS region transcription start site region 34688
Gm15999 3 97892231 to 97901089 8858 - lincRNA gene predicted gene 15999
Cpgi13599 3 97901096 to 97901571 475 CpG island CpG island 13599
Tssr30804 3 97901199 to 97901250 51 + TSS region transcription start site region 30804
Sec22b 3 97901227 to 97922318 21091 + protein coding gene SEC22 homolog B, vesicle trafficking protein
Tssr30805 3 97922188 to 97922242 54 + TSS region transcription start site region 30805
Gm5544 3 97930173 to 97967018 36845 + lincRNA gene predicted gene 5544
Tssr30806 3 97930275 to 97930284 9 + TSS region transcription start site region 30806
Tssr30807 3 97930394 to 97930422 28 + TSS region transcription start site region 30807
Tssr34689 3 97931658 to 97931718 60 - TSS region transcription start site region 34689
Tssr34690 3 97931720 to 97931746 26 - TSS region transcription start site region 34690
Tssr30808 3 97978922 to 97978986 64 + TSS region transcription start site region 30808
Tssr30809 3 97992465 to 97992469 4 + TSS region transcription start site region 30809
Tssr34691 3 97994938 to 97994963 25 - TSS region transcription start site region 34691
Tssr975 3 97998416 to 97998425 9 - TSS region transcription start site region 975
D3Mit298.2 3 98010743 to 98010858 115 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 298.2
Cpgi13600 3 98013007 to 98014283 1276 CpG island CpG island 13600
Tssr30810 3 98013483 to 98013502 19 + TSS region transcription start site region 30810
Tssr30811 3 98013503 to 98013547 44 + TSS region transcription start site region 30811
Notch2 3 98013538 to 98150367 136829 + protein coding gene notch 2
Tssr30812 3 98013550 to 98013574 24 + TSS region transcription start site region 30812
Tssr30813 3 98013592 to 98013609 17 + TSS region transcription start site region 30813
Tssr30814 3 98013620 to 98013631 11 + TSS region transcription start site region 30814
Gm40103 3 98022306 to 98026882 4576 - lncRNA gene predicted gene, 40103
Cpgi13601 3 98024433 to 98024593 160 CpG island CpG island 13601
Gm42819 3 98030687 to 98035807 5120 + unclassified gene predicted gene 42819
Tssr34692 3 98032354 to 98032359 5 - TSS region transcription start site region 34692
Tssr30815 3 98037439 to 98037443 4 + TSS region transcription start site region 30815
Tssr30816 3 98045087 to 98045090 3 + TSS region transcription start site region 30816
Tssr34693 3 98069339 to 98069351 12 - TSS region transcription start site region 34693
Tssr30817 3 98109199 to 98109218 19 + TSS region transcription start site region 30817
Tssr30818 3 98114358 to 98114377 19 + TSS region transcription start site region 30818
Gm42820 3 98121588 to 98124650 3062 + unclassified gene predicted gene 42820
Tssr30819 3 98127009 to 98127031 22 + TSS region transcription start site region 30819
Tssr30820 3 98127092 to 98127117 25 + TSS region transcription start site region 30820