Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:97510742-97660203

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr34659 3 97546279 to 97546317 38 - TSS region transcription start site region 34659
Gm40102 3 97546303 to 97572590 26287 + lncRNA gene predicted gene, 40102
Chd1l 3 97560742 to 97610203 49461 - protein coding gene chromodomain helicase DNA binding protein 1-like
Cpgi13591 3 97609627 to 97610403 776 CpG island CpG island 13591
Gm43075 3 97609932 to 97613836 3904 + unclassified gene predicted gene 43075
Tssr34660 3 97610156 to 97610222 66 - TSS region transcription start site region 34660
Fmo5 3 97628804 to 97655282 26478 + protein coding gene flavin containing monooxygenase 5
Tssr30791 3 97628844 to 97628864 20 + TSS region transcription start site region 30791
Tssr30792 3 97633158 to 97633169 11 + TSS region transcription start site region 30792
Tssr30793 3 97651674 to 97651694 20 + TSS region transcription start site region 30793
Tssr30794 3 97651751 to 97651765 14 + TSS region transcription start site region 30794
Tssr30795 3 97651785 to 97651797 12 + TSS region transcription start site region 30795
Tssr30796 3 97651822 to 97651830 8 + TSS region transcription start site region 30796
Tssr30797 3 97651853 to 97651865 12 + TSS region transcription start site region 30797
Tssr974 3 97651889 to 97651920 31 + TSS region transcription start site region 974
Tssr30798 3 97651972 to 97652046 74 + TSS region transcription start site region 30798
Cpgi13592 3 97657858 to 97658985 1127 CpG island CpG island 13592
Prkab2 3 97658212 to 97673812 15600 + protein coding gene protein kinase, AMP-activated, beta 2 non-catalytic subunit
Tssr30799 3 97658291 to 97658339 48 + TSS region transcription start site region 30799
Tssr30800 3 97658383 to 97658392 9 + TSS region transcription start site region 30800
Tssr30801 3 97658555 to 97658615 60 + TSS region transcription start site region 30801
Tssr30802 3 97658616 to 97658628 12 + TSS region transcription start site region 30802