Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:96394825-96434839

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
n-TQctg4 3 96399059 to 96399130 71 - tRNA gene nuclear encoded tRNA glutamine 4 (anticodon CTG)
4930477E14Rik 3 96401150 to 96402014 864 - lincRNA gene RIKEN cDNA 4930477E14 gene
Cpgi13556 3 96401679 to 96402441 762 CpG island CpG island 13556
Tssr34622 3 96401995 to 96402005 10 - TSS region transcription start site region 34622
Tssr34623 3 96402010 to 96402017 7 - TSS region transcription start site region 34623
Tssr30713 3 96402096 to 96402110 14 + TSS region transcription start site region 30713
Tssr30714 3 96402118 to 96402121 3 + TSS region transcription start site region 30714
Tssr30715 3 96402124 to 96402136 12 + TSS region transcription start site region 30715
n-TNgtt10 3 96402218 to 96402291 73 + tRNA gene nuclear encoded tRNA asparagine 10 (anticodon GTT)
Gm26654 3 96402480 to 96402952 472 + lincRNA gene predicted gene, 26654
Cpgi13557 3 96404381 to 96404811 430 CpG island CpG island 13557
Pafah1b1-ps1 3 96407517 to 96409059 1542 - pseudogene platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, pseudogene 1
Cpgi13558 3 96409327 to 96410262 935 CpG island CpG island 13558
n-THgtg6 3 96410069 to 96410140 71 + tRNA gene nuclear encoded tRNA histidine 6 (anticodon GTG)
Gm21960 3 96412910 to 96413361 451 - pseudogene predicted gene, 21960
Cpgi13559 3 96414163 to 96414951 788 CpG island CpG island 13559
Terc 3 96414437 to 96414833 396 - telomerase RNA gene telomerase RNA component
Tssr34624 3 96414825 to 96414839 14 - TSS region transcription start site region 34624
Tssr34625 3 96417732 to 96417759 27 - TSS region transcription start site region 34625
Gm24136 3 96422733 to 96422897 164 + snRNA gene predicted gene, 24136
n-TGccc6 3 96424033 to 96424103 70 - tRNA gene nuclear encoded tRNA glycine 6 (anticodon CCC)
n-TKctt15 3 96428235 to 96428307 72 + tRNA gene nuclear encoded tRNA lysine 15 (anticodon CTT)
BC107364 3 96433788 to 96452306 18518 - protein coding gene cDNA sequence BC107364