Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:96171227-96205183

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mtmr11 3 96162004 to 96171718 9714 + protein coding gene myotubularin related protein 11
Gm17690 3 96167464 to 96172416 4952 - antisense lncRNA gene predicted gene, 17690
Cpgi13537 3 96172026 to 96173183 1157 CpG island CpG island 13537
Tssr30689 3 96172327 to 96172338 11 + TSS region transcription start site region 30689
Tssr30690 3 96172352 to 96172368 16 + TSS region transcription start site region 30690
Tssr34592 3 96172384 to 96172462 78 - TSS region transcription start site region 34592
Sf3b4 3 96172506 to 96177564 5058 + protein coding gene splicing factor 3b, subunit 4
Tssr30691 3 96172507 to 96172530 23 + TSS region transcription start site region 30691
Tssr30692 3 96172534 to 96172564 30 + TSS region transcription start site region 30692
Tssr30693 3 96173982 to 96173996 14 + TSS region transcription start site region 30693
Gm22027 3 96176361 to 96176487 126 + snoRNA gene predicted gene, 22027
Cpgi13538 3 96181103 to 96181334 231 CpG island CpG island 13538
Tssr30694 3 96181156 to 96181167 11 + TSS region transcription start site region 30694
Tssr30695 3 96181178 to 96181233 55 + TSS region transcription start site region 30695
Sv2a 3 96181227 to 96195183 13956 + protein coding gene synaptic vesicle glycoprotein 2 a
Tssr30696 3 96184732 to 96184759 27 + TSS region transcription start site region 30696
Cpgi13539 3 96184990 to 96185518 528 CpG island CpG island 13539
Tssr30697 3 96195396 to 96195406 10 + TSS region transcription start site region 30697
Tssr30698 3 96195428 to 96195436 8 + TSS region transcription start site region 30698
Bola1 3 96196583 to 96198483 1900 - protein coding gene bolA-like 1 (E. coli)
Cpgi13540 3 96196668 to 96197747 1079 CpG island CpG island 13540
Tssr34593 3 96197580 to 96197634 54 - TSS region transcription start site region 34593
Tssr34594 3 96198460 to 96198484 24 - TSS region transcription start site region 34594