Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:95758821-95878877

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rprd2 3 95760341 to 95818863 58522 - protein coding gene regulation of nuclear pre-mRNA domain containing 2
Tssr34542 3 95761881 to 95761886 5 - TSS region transcription start site region 34542
Gm43436 3 95780724 to 95780870 146 + pseudogene predicted gene 43436
Gm26361 3 95796699 to 95796884 185 - snRNA gene predicted gene, 26361
Gm17815 3 95804855 to 95805749 894 + pseudogene predicted gene, 17815
Cpgi13521 3 95818197 to 95820031 1834 CpG island CpG island 13521
Tssr34543 3 95818747 to 95818801 54 - TSS region transcription start site region 34543
Tssr34544 3 95818821 to 95818877 56 - TSS region transcription start site region 34544
Tssr34545 3 95818895 to 95818907 12 - TSS region transcription start site region 34545
Tssr34546 3 95818941 to 95818990 49 - TSS region transcription start site region 34546
Gm29948 3 95819047 to 95821901 2854 + lncRNA gene predicted gene, 29948
Tssr34547 3 95819058 to 95819075 17 - TSS region transcription start site region 34547
Tssr34548 3 95819211 to 95819247 36 - TSS region transcription start site region 34548
Tssr30646 3 95819319 to 95819322 3 + TSS region transcription start site region 30646
Tssr34549 3 95819346 to 95819380 34 - TSS region transcription start site region 34549
Prpf3 3 95830124 to 95855885 25761 - protein coding gene pre-mRNA processing factor 3
Cpgi13522 3 95855420 to 95856120 700 CpG island CpG island 13522
Tssr34550 3 95855777 to 95855822 45 - TSS region transcription start site region 34550
Tssr34551 3 95855860 to 95855889 29 - TSS region transcription start site region 34551
Gm26594 3 95855966 to 95861485 5519 + lincRNA gene predicted gene, 26594
Mrps21 3 95862634 to 95871519 8885 - protein coding gene mitochondrial ribosomal protein S21
Cpgi13523 3 95865601 to 95865896 295 CpG island CpG island 13523
Cpgi13524 3 95871300 to 95871770 470 CpG island CpG island 13524
Tssr34552 3 95871470 to 95871511 41 - TSS region transcription start site region 34552
Tssr30647 3 95871519 to 95871580 61 + TSS region transcription start site region 30647
C920021L13Rik 3 95871522 to 95889093 17571 + antisense lncRNA gene RIKEN cDNA C920021L13 gene
Tssr30648 3 95871585 to 95871635 50 + TSS region transcription start site region 30648
Tssr30649 3 95877053 to 95877059 6 + TSS region transcription start site region 30649
Ciart 3 95878500 to 95882242 3742 - protein coding gene circadian associated repressor of transcription