Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:95688088-95788117

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi13518 3 95687511 to 95688256 745 CpG island CpG island 13518
D3Umi13 3 95701987 to 95702288 301 DNA segment DNA segment, Chr 3, University of Michigan 13
Tssr34520 3 95702003 to 95702034 31 - TSS region transcription start site region 34520
D3Umi14 3 95707581 to 95707988 407 DNA segment DNA segment, Chr 3, University of Michigan 14
Tssr34521 3 95710696 to 95710699 3 - TSS region transcription start site region 34521
D3Umi15 3 95711627 to 95712399 772 DNA segment DNA segment, Chr 3, University of Michigan 15
D3Umi16 3 95714368 to 95714863 495 DNA segment DNA segment, Chr 3, University of Michigan 16
D3Umi17 3 95715201 to 95715661 460 DNA segment DNA segment, Chr 3, University of Michigan 17
D3Umi18 3 95716342 to 95717133 791 DNA segment DNA segment, Chr 3, University of Michigan 18
D3Umi19 3 95716935 to 95718035 1100 DNA segment DNA segment, Chr 3, University of Michigan 19
D3Umi20 3 95717854 to 95718932 1078 DNA segment DNA segment, Chr 3, University of Michigan 20
D3Umi21 3 95718743 to 95719724 981 DNA segment DNA segment, Chr 3, University of Michigan 21
Tssr972 3 95719153 to 95719160 7 + TSS region transcription start site region 972
D3Umi22 3 95721222 to 95722311 1089 DNA segment DNA segment, Chr 3, University of Michigan 22
D3Umi23 3 95724043 to 95725118 1075 DNA segment DNA segment, Chr 3, University of Michigan 23
D3Umi24 3 95726149 to 95726690 541 DNA segment DNA segment, Chr 3, University of Michigan 24
Ecm1 3 95734147 to 95739569 5422 - protein coding gene extracellular matrix protein 1
D3Umi25 3 95734713 to 95735027 314 DNA segment DNA segment, Chr 3, University of Michigan 25
Mir7014 3 95734911 to 95734973 62 - miRNA gene microRNA 7014
Tssr34522 3 95735312 to 95735324 12 - TSS region transcription start site region 34522
Cpgi13519 3 95735813 to 95735971 158 CpG island CpG island 13519
Tssr34523 3 95735872 to 95735885 13 - TSS region transcription start site region 34523
Tssr30643 3 95735907 to 95735938 31 + TSS region transcription start site region 30643
Tssr34524 3 95735973 to 95735985 12 - TSS region transcription start site region 34524
Tssr34525 3 95736020 to 95736052 32 - TSS region transcription start site region 34525
Tssr34526 3 95736080 to 95736121 41 - TSS region transcription start site region 34526
Tssr30644 3 95736120 to 95736143 23 + TSS region transcription start site region 30644
Tssr30645 3 95736170 to 95736182 12 + TSS region transcription start site region 30645
Tssr34527 3 95736181 to 95736194 13 - TSS region transcription start site region 34527
Tssr34528 3 95736546 to 95736565 19 - TSS region transcription start site region 34528
Tssr34529 3 95736596 to 95736650 54 - TSS region transcription start site region 34529
Tssr34530 3 95736685 to 95736719 34 - TSS region transcription start site region 34530
Tssr34531 3 95737048 to 95737061 13 - TSS region transcription start site region 34531
Tssr34532 3 95737656 to 95737681 25 - TSS region transcription start site region 34532
Tssr34533 3 95737682 to 95737699 17 - TSS region transcription start site region 34533
Tssr34534 3 95737831 to 95737871 40 - TSS region transcription start site region 34534
Tssr34535 3 95737874 to 95737891 17 - TSS region transcription start site region 34535
Tssr34536 3 95738088 to 95738117 29 - TSS region transcription start site region 34536
Tssr34537 3 95738260 to 95738308 48 - TSS region transcription start site region 34537
Tssr34538 3 95739554 to 95739576 22 - TSS region transcription start site region 34538
Tars2 3 95739974 to 95754977 15003 - protein coding gene threonyl-tRNA synthetase 2, mitochondrial (putative)
Cpgi13520 3 95754626 to 95754984 358 CpG island CpG island 13520
Tssr34539 3 95754796 to 95754803 7 - TSS region transcription start site region 34539
Tssr34540 3 95754824 to 95754831 7 - TSS region transcription start site region 34540
Tssr34541 3 95754841 to 95754887 46 - TSS region transcription start site region 34541
Rprd2 3 95760341 to 95818863 58522 - protein coding gene regulation of nuclear pre-mRNA domain containing 2
Tssr34542 3 95761881 to 95761886 5 - TSS region transcription start site region 34542
Gm43436 3 95780724 to 95780870 146 + pseudogene predicted gene 43436