Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:93446054-93606090

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm37245 3 93306468 to 93465359 158891 - lincRNA gene predicted gene, 37245
Tchh 3 93442330 to 93449077 6747 + protein coding gene trichohyalin
Cpgi13475 3 93443525 to 93448020 4495 CpG island CpG island 13475
Tssr30400 3 93446076 to 93446084 8 + TSS region transcription start site region 30400
Tssr30401 3 93446096 to 93446105 9 + TSS region transcription start site region 30401
Tssr30402 3 93446195 to 93446205 10 + TSS region transcription start site region 30402
Tssr34372 3 93446208 to 93446218 10 - TSS region transcription start site region 34372
Tssr30403 3 93446235 to 93446242 7 + TSS region transcription start site region 30403
Tssr30404 3 93447373 to 93447381 8 + TSS region transcription start site region 30404
Tssr34373 3 93447376 to 93447403 27 - TSS region transcription start site region 34373
Tssr30405 3 93447484 to 93447496 12 + TSS region transcription start site region 30405
Tssr30406 3 93447632 to 93447643 11 + TSS region transcription start site region 30406
Tssr30407 3 93447827 to 93447833 6 + TSS region transcription start site region 30407
Tssr34374 3 93465356 to 93465361 5 - TSS region transcription start site region 34374
Tssr30408 3 93468751 to 93468756 5 + TSS region transcription start site region 30408
Tchhl1 3 93468754 to 93471980 3226 + protein coding gene trichohyalin-like 1
Tssr30409 3 93470679 to 93470687 8 + TSS region transcription start site region 30409
D3Umi2 3 93482556 to 93482691 135 DNA segment DNA segment, Chr 3, University of Michigan 2
Gm36953 3 93499815 to 93500300 485 - pseudogene predicted gene, 36953
Tssr34375 3 93500322 to 93500334 12 - TSS region transcription start site region 34375
Tssr965 3 93505015 to 93505023 8 + TSS region transcription start site region 965
Tssr30410 3 93505048 to 93505092 44 + TSS region transcription start site region 30410
Tssr30411 3 93506582 to 93506601 19 + TSS region transcription start site region 30411
Tssr30412 3 93506606 to 93506613 7 + TSS region transcription start site region 30412
Tssr34376 3 93511168 to 93511185 17 - TSS region transcription start site region 34376
Tssr30413 3 93511275 to 93511296 21 + TSS region transcription start site region 30413
Tssr30414 3 93511297 to 93511320 23 + TSS region transcription start site region 30414
Tssr30415 3 93520369 to 93520391 22 + TSS region transcription start site region 30415
Tssr30416 3 93520473 to 93520501 28 + TSS region transcription start site region 30416
S100a11 3 93520496 to 93526288 5792 + protein coding gene S100 calcium binding protein A11
Cpgi13476 3 93520799 to 93520996 197 CpG island CpG island 13476
Tssr30417 3 93526054 to 93526090 36 + TSS region transcription start site region 30417
Gm29950 3 93530509 to 93530745 236 - pseudogene predicted gene, 29950
Tssr30418 3 93547940 to 93547951 11 + TSS region transcription start site region 30418
Cpgi13477 3 93555045 to 93555449 404 CpG island CpG island 13477
S100a10 3 93555080 to 93564643 9563 + protein coding gene S100 calcium binding protein A10 (calpactin)
Tssr30419 3 93555111 to 93555122 11 + TSS region transcription start site region 30419
Tssr30420 3 93555126 to 93555152 26 + TSS region transcription start site region 30420
Tssr30421 3 93555155 to 93555171 16 + TSS region transcription start site region 30421
Tssr30422 3 93560936 to 93560945 9 + TSS region transcription start site region 30422
Gm40093 3 93595359 to 93597504 2145 - lncRNA gene predicted gene, 40093
Gm18331 3 93605168 to 93605714 546 + pseudogene predicted gene, 18331