Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:93123546-93443689

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm35785 3 93097581 to 93128245 30664 - lncRNA gene predicted gene, 35785
Tssr30318 3 93144782 to 93144798 16 + TSS region transcription start site region 30318
Crnn 3 93144787 to 93149471 4684 + protein coding gene cornulin
D3Umi1 3 93148199 to 93148605 406 DNA segment DNA segment, Chr 3, University of Michigan 1
Gm37501 3 93152178 to 93152868 690 + pseudogene predicted gene, 37501
Tssr30319 3 93188582 to 93188600 18 + TSS region transcription start site region 30319
Tssr30320 3 93197270 to 93197284 14 + TSS region transcription start site region 30320
Flg2 3 93197273 to 93221377 24104 + protein coding gene filaggrin family member 2
Gm18432 3 93234919 to 93236176 1257 + pseudogene predicted gene, 18432
D3Mit141.1 3 93237291 to 93237453 162 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 141.1
D3Mit141 3 93237373 to 93237521 148 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 141
D3Mit141.2 3 93237535 to 93237649 114 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 141.2
Tssr30321 3 93273519 to 93273524 5 + TSS region transcription start site region 30321
Flg 3 93273546 to 93293689 20143 + protein coding gene filaggrin
Tssr30322 3 93277544 to 93277560 16 + TSS region transcription start site region 30322
Tssr30323 3 93277583 to 93277591 8 + TSS region transcription start site region 30323
Tssr958 3 93277607 to 93277627 20 + TSS region transcription start site region 958
Tssr30324 3 93277639 to 93277652 13 + TSS region transcription start site region 30324
Tssr30325 3 93277663 to 93277679 16 + TSS region transcription start site region 30325
Tssr30326 3 93278064 to 93278072 8 + TSS region transcription start site region 30326
Rplp0-ps1 3 93278141 to 93279073 932 + pseudogene ribosomal protein, large, P0, pseudogene 1
Tssr30327 3 93279392 to 93279403 11 + TSS region transcription start site region 30327
Tssr30328 3 93279454 to 93279514 60 + TSS region transcription start site region 30328
Tssr30329 3 93279526 to 93279534 8 + TSS region transcription start site region 30329
Tssr30330 3 93279546 to 93279557 11 + TSS region transcription start site region 30330
Tssr959 3 93279559 to 93279567 8 + TSS region transcription start site region 959
Tssr30331 3 93279581 to 93279607 26 + TSS region transcription start site region 30331
Tssr30332 3 93279608 to 93279611 3 + TSS region transcription start site region 30332
Tssr34344 3 93279629 to 93279694 65 - TSS region transcription start site region 34344
Tssr34345 3 93279702 to 93279743 41 - TSS region transcription start site region 34345
Tssr30333 3 93279706 to 93279718 12 + TSS region transcription start site region 30333
Tssr34346 3 93279759 to 93279764 5 - TSS region transcription start site region 34346
Tssr34347 3 93279808 to 93279822 14 - TSS region transcription start site region 34347
Tssr30334 3 93293059 to 93293066 7 + TSS region transcription start site region 30334
Tssr30335 3 93293079 to 93293098 19 + TSS region transcription start site region 30335
Tssr30336 3 93293108 to 93293119 11 + TSS region transcription start site region 30336
Tssr30337 3 93293132 to 93293147 15 + TSS region transcription start site region 30337
Tssr30338 3 93293166 to 93293186 20 + TSS region transcription start site region 30338
Tssr30339 3 93293326 to 93293333 7 + TSS region transcription start site region 30339
Gm37922 3 93305015 to 93305469 454 + pseudogene predicted gene, 37922
Gm37245 3 93306468 to 93465359 158891 - lincRNA gene predicted gene, 37245
Gm37913 3 93306468 to 93309011 2543 + unclassified gene predicted gene, 37913
Tssr30340 3 93319740 to 93319754 14 + TSS region transcription start site region 30340
Hrnr 3 93319749 to 93333570 13821 + protein coding gene hornerin
Tssr34348 3 93376376 to 93376386 10 - TSS region transcription start site region 34348
Gm44353 3 93388689 to 93388826 137 + miRNA gene predicted gene, 44353
Tssr30341 3 93393696 to 93393699 3 + TSS region transcription start site region 30341
Gm37857 3 93393698 to 93394896 1198 + unclassified gene predicted gene, 37857
Rptn 3 93393699 to 93399442 5743 + protein coding gene repetin
Tssr30342 3 93397933 to 93397944 11 + TSS region transcription start site region 30342
Tssr30343 3 93398213 to 93398226 13 + TSS region transcription start site region 30343
Tssr34349 3 93411973 to 93412004 31 - TSS region transcription start site region 34349
Gm18296 3 93420682 to 93421364 682 - pseudogene predicted gene, 18296
Gm22752 3 93433197 to 93433305 108 - miRNA gene predicted gene, 22752
Gm5278 3 93433215 to 93433766 551 - pseudogene predicted pseudogene 5278
Tssr34350 3 93433848 to 93433854 6 - TSS region transcription start site region 34350
Tssr34351 3 93433940 to 93433962 22 - TSS region transcription start site region 34351
Tssr30344 3 93440761 to 93440764 3 + TSS region transcription start site region 30344
Tchh 3 93442330 to 93449077 6747 + protein coding gene trichohyalin
Tssr30345 3 93442371 to 93442389 18 + TSS region transcription start site region 30345
Tssr30346 3 93442407 to 93442414 7 + TSS region transcription start site region 30346
Tssr960 3 93443427 to 93443430 3 + TSS region transcription start site region 960
Tssr30347 3 93443451 to 93443473 22 + TSS region transcription start site region 30347
Tssr30348 3 93443490 to 93443493 3 + TSS region transcription start site region 30348
Tssr30349 3 93443496 to 93443505 9 + TSS region transcription start site region 30349
Cpgi13475 3 93443525 to 93448020 4495 CpG island CpG island 13475
Tssr30350 3 93443538 to 93443549 11 + TSS region transcription start site region 30350
Tssr30351 3 93443569 to 93443573 4 + TSS region transcription start site region 30351
Tssr30352 3 93443618 to 93443623 5 + TSS region transcription start site region 30352
Tssr30353 3 93443630 to 93443642 12 + TSS region transcription start site region 30353
Tssr30354 3 93443648 to 93443657 9 + TSS region transcription start site region 30354
Tssr30355 3 93443667 to 93443676 9 + TSS region transcription start site region 30355
Tssr30356 3 93443680 to 93443730 50 + TSS region transcription start site region 30356