Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:92757810-93279060

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lce1h 3 92763215 to 92765065 1850 - protein coding gene late cornified envelope 1H
Tssr34332 3 92765060 to 92765066 6 - TSS region transcription start site region 34332
Lce1i 3 92777210 to 92778899 1689 - protein coding gene late cornified envelope 1I
Tssr34333 3 92778895 to 92778903 8 - TSS region transcription start site region 34333
Lce1j 3 92788844 to 92790514 1670 - protein coding gene late cornified envelope 1J
Lce1k 3 92806291 to 92807891 1600 - protein coding gene late cornified envelope 1K
Tssr34334 3 92807891 to 92807904 13 - TSS region transcription start site region 34334
Tssr957 3 92813516 to 92813521 5 - TSS region transcription start site region 957
Kprp 3 92823074 to 92827247 4173 - protein coding gene keratinocyte expressed, proline-rich
Cpgi13472 3 92823940 to 92824378 438 CpG island CpG island 13472
Tssr34335 3 92825035 to 92825046 11 - TSS region transcription start site region 34335
Tssr34336 3 92827239 to 92827257 18 - TSS region transcription start site region 34336
Gm38201 3 92843297 to 92843683 386 - lincRNA gene predicted gene, 38201
Lce1l 3 92849949 to 92851286 1337 - protein coding gene late cornified envelope 1L
Tssr34337 3 92851284 to 92851286 2 - TSS region transcription start site region 34337
2310050C09Rik 3 92868359 to 92870205 1846 - protein coding gene RIKEN cDNA 2310050C09 gene
Tssr34338 3 92868995 to 92869007 12 - TSS region transcription start site region 34338
Tssr34339 3 92870215 to 92870224 9 - TSS region transcription start site region 34339
Lce3a 3 92925287 to 92926230 943 - protein coding gene late cornified envelope 3A
Tssr34340 3 92926242 to 92926247 5 - TSS region transcription start site region 34340
Tssr30313 3 92932975 to 92932983 8 + TSS region transcription start site region 30313
Lce3b 3 92932979 to 92934096 1117 + protein coding gene late cornified envelope 3B
Gm38078 3 92937681 to 92938072 391 + pseudogene predicted gene, 38078
Tssr30314 3 92944483 to 92944487 4 + TSS region transcription start site region 30314
Lce3c 3 92944486 to 92945730 1244 + protein coding gene late cornified envelope 3C
Gm24481 3 92949158 to 92949259 101 - snRNA gene predicted gene, 24481
Tssr30315 3 92957386 to 92957389 3 + TSS region transcription start site region 30315
Lce3d 3 92957390 to 92958505 1115 + protein coding gene late cornified envelope 3D
Gm22577 3 92962008 to 92962116 108 - snRNA gene predicted gene, 22577
Tssr30316 3 92967059 to 92967062 3 + TSS region transcription start site region 30316
Lce3e 3 92967061 to 92968281 1220 + protein coding gene late cornified envelope 3E
Tssr30317 3 92992213 to 92992221 8 + TSS region transcription start site region 30317
Lce3f 3 92992226 to 92993426 1200 + protein coding gene late cornified envelope 3F
Crct1 3 93014205 to 93015686 1481 - protein coding gene cysteine-rich C-terminal 1
Cpgi13473 3 93014470 to 93014796 326 CpG island CpG island 13473
Tssr34341 3 93015679 to 93015694 15 - TSS region transcription start site region 34341
D3Mit311 3 93017195 to 93017313 118 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology 311
Lce1m 3 93017810 to 93019060 1250 - protein coding gene late cornified envelope 1M
Cpgi13474 3 93018148 to 93018472 324 CpG island CpG island 13474
Tssr34342 3 93019057 to 93019060 3 - TSS region transcription start site region 34342
Gm38040 3 93064740 to 93064964 224 - pseudogene predicted gene, 38040
Gm4858 3 93068823 to 93075505 6682 + protein coding gene predicted gene 4858
Gm35785 3 93097581 to 93128245 30664 - lncRNA gene predicted gene, 35785
Gm37361 3 93100466 to 93100597 131 - pseudogene predicted gene, 37361
Tssr34343 3 93100670 to 93100674 4 - TSS region transcription start site region 34343
Tssr30318 3 93144782 to 93144798 16 + TSS region transcription start site region 30318
Crnn 3 93144787 to 93149471 4684 + protein coding gene cornulin
D3Umi1 3 93148199 to 93148605 406 DNA segment DNA segment, Chr 3, University of Michigan 1
Gm37501 3 93152178 to 93152868 690 + pseudogene predicted gene, 37501
Tssr30319 3 93188582 to 93188600 18 + TSS region transcription start site region 30319
Tssr30320 3 93197270 to 93197284 14 + TSS region transcription start site region 30320
Flg2 3 93197273 to 93221377 24104 + protein coding gene filaggrin family member 2
Gm18432 3 93234919 to 93236176 1257 + pseudogene predicted gene, 18432
D3Mit141.1 3 93237291 to 93237453 162 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 141.1
D3Mit141 3 93237373 to 93237521 148 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 141
D3Mit141.2 3 93237535 to 93237649 114 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 141.2
Tssr30321 3 93273519 to 93273524 5 + TSS region transcription start site region 30321
Flg 3 93273546 to 93293689 20143 + protein coding gene filaggrin
Tssr30322 3 93277544 to 93277560 16 + TSS region transcription start site region 30322
Tssr30323 3 93277583 to 93277591 8 + TSS region transcription start site region 30323
Tssr958 3 93277607 to 93277627 20 + TSS region transcription start site region 958
Tssr30324 3 93277639 to 93277652 13 + TSS region transcription start site region 30324
Tssr30325 3 93277663 to 93277679 16 + TSS region transcription start site region 30325
Tssr30326 3 93278064 to 93278072 8 + TSS region transcription start site region 30326
Rplp0-ps1 3 93278141 to 93279073 932 + pseudogene ribosomal protein, large, P0, pseudogene 1