Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:90489370-90539379

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Snapin 3 90488026 to 90491013 2987 - protein coding gene SNAP-associated protein
Tssr34232 3 90490717 to 90490767 50 - TSS region transcription start site region 34232
Cpgi13464 3 90490752 to 90491182 430 CpG island CpG island 13464
Tssr34233 3 90490782 to 90490790 8 - TSS region transcription start site region 34233
Tssr34234 3 90490975 to 90491038 63 - TSS region transcription start site region 34234
Chtop 3 90498956 to 90509498 10542 - protein coding gene chromatin target of PRMT1
Tssr34235 3 90506370 to 90506381 11 - TSS region transcription start site region 34235
Tssr34236 3 90508059 to 90508063 4 - TSS region transcription start site region 34236
Tssr34237 3 90508727 to 90508731 4 - TSS region transcription start site region 34237
Cpgi13465 3 90508761 to 90509769 1008 CpG island CpG island 13465
Tssr30207 3 90509077 to 90509105 28 + TSS region transcription start site region 30207
Tssr34238 3 90509456 to 90509506 50 - TSS region transcription start site region 34238
Tssr34239 3 90509517 to 90509528 11 - TSS region transcription start site region 34239
Tssr30208 3 90509640 to 90509686 46 + TSS region transcription start site region 30208
S100a1 3 90511034 to 90514330 3296 - protein coding gene S100 calcium binding protein A1
Tssr34240 3 90511133 to 90511174 41 - TSS region transcription start site region 34240
Tssr34241 3 90512020 to 90512066 46 - TSS region transcription start site region 34241
Cpgi13466 3 90514184 to 90514344 160 CpG island CpG island 13466
Tssr34242 3 90514250 to 90514334 84 - TSS region transcription start site region 34242
Tssr34243 3 90514356 to 90514366 10 - TSS region transcription start site region 34243
Tssr34244 3 90514370 to 90514379 9 - TSS region transcription start site region 34244
Tssr34245 3 90514405 to 90514420 15 - TSS region transcription start site region 34245
S100a13 3 90514435 to 90524581 10146 + protein coding gene S100 calcium binding protein A13
Tssr30209 3 90514918 to 90514976 58 + TSS region transcription start site region 30209
Tssr30210 3 90514984 to 90514998 14 + TSS region transcription start site region 30210
Tssr30211 3 90526774 to 90526779 5 + TSS region transcription start site region 30211
Tssr30212 3 90526825 to 90526832 7 + TSS region transcription start site region 30212
Tssr30213 3 90526856 to 90526859 3 + TSS region transcription start site region 30213
S100a14 3 90526856 to 90528837 1981 + protein coding gene S100 calcium binding protein A14
Tssr30214 3 90526861 to 90526881 20 + TSS region transcription start site region 30214
Tssr30215 3 90527142 to 90527176 34 + TSS region transcription start site region 30215
Tssr30216 3 90527739 to 90527753 14 + TSS region transcription start site region 30216
Tssr30217 3 90537230 to 90537241 11 + TSS region transcription start site region 30217
Tssr30218 3 90537242 to 90537270 28 + TSS region transcription start site region 30218
S100a16 3 90537257 to 90543151 5894 + protein coding gene S100 calcium binding protein A16
Tssr30219 3 90537291 to 90537304 13 + TSS region transcription start site region 30219
Tssr30220 3 90537306 to 90537326 20 + TSS region transcription start site region 30220
Tssr30221 3 90537333 to 90537386 53 + TSS region transcription start site region 30221