Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:90465717-90515767

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Npr1 3 90450591 to 90465866 15275 - protein coding gene natriuretic peptide receptor 1
Cpgi13462 3 90464535 to 90466386 1851 CpG island CpG island 13462
Tssr34225 3 90465793 to 90465796 3 - TSS region transcription start site region 34225
Tssr34226 3 90465814 to 90465819 5 - TSS region transcription start site region 34226
Tssr34227 3 90465832 to 90465846 14 - TSS region transcription start site region 34227
Tssr34228 3 90465858 to 90465874 16 - TSS region transcription start site region 34228
Tssr30204 3 90466085 to 90466090 5 + TSS region transcription start site region 30204
Tssr34229 3 90466329 to 90466358 29 - TSS region transcription start site region 34229
Tssr34230 3 90466362 to 90466404 42 - TSS region transcription start site region 34230
Gm43595 3 90468898 to 90470959 2061 - pseudogene predicted gene 43595
Cpgi13463 3 90475845 to 90476543 698 CpG island CpG island 13463
n-TMcat11 3 90475860 to 90475931 71 - tRNA gene nuclear encoded tRNA methionine 11 (anticodon CAT)
Tssr30205 3 90476121 to 90476220 99 + TSS region transcription start site region 30205
Ilf2 3 90476201 to 90488379 12178 + protein coding gene interleukin enhancer binding factor 2
Tssr30206 3 90484531 to 90484539 8 + TSS region transcription start site region 30206
Tssr944 3 90487933 to 90487937 4 + TSS region transcription start site region 944
Snapin 3 90488026 to 90491013 2987 - protein coding gene SNAP-associated protein
Tssr34231 3 90489143 to 90489157 14 - TSS region transcription start site region 34231
Tssr34232 3 90490717 to 90490767 50 - TSS region transcription start site region 34232
Cpgi13464 3 90490752 to 90491182 430 CpG island CpG island 13464
Tssr34233 3 90490782 to 90490790 8 - TSS region transcription start site region 34233
Tssr34234 3 90490975 to 90491038 63 - TSS region transcription start site region 34234
Chtop 3 90498956 to 90509498 10542 - protein coding gene chromatin target of PRMT1
Tssr34235 3 90506370 to 90506381 11 - TSS region transcription start site region 34235
Tssr34236 3 90508059 to 90508063 4 - TSS region transcription start site region 34236
Tssr34237 3 90508727 to 90508731 4 - TSS region transcription start site region 34237
Cpgi13465 3 90508761 to 90509769 1008 CpG island CpG island 13465
Tssr30207 3 90509077 to 90509105 28 + TSS region transcription start site region 30207
Tssr34238 3 90509456 to 90509506 50 - TSS region transcription start site region 34238
Tssr34239 3 90509517 to 90509528 11 - TSS region transcription start site region 34239
Tssr30208 3 90509640 to 90509686 46 + TSS region transcription start site region 30208
S100a1 3 90511034 to 90514330 3296 - protein coding gene S100 calcium binding protein A1
Tssr34240 3 90511133 to 90511174 41 - TSS region transcription start site region 34240
Tssr34241 3 90512020 to 90512066 46 - TSS region transcription start site region 34241
Cpgi13466 3 90514184 to 90514344 160 CpG island CpG island 13466
Tssr34242 3 90514250 to 90514334 84 - TSS region transcription start site region 34242
Tssr34243 3 90514356 to 90514366 10 - TSS region transcription start site region 34243
Tssr34244 3 90514370 to 90514379 9 - TSS region transcription start site region 34244
Tssr34245 3 90514405 to 90514420 15 - TSS region transcription start site region 34245
S100a13 3 90514435 to 90524581 10146 + protein coding gene S100 calcium binding protein A13
Tssr30209 3 90514918 to 90514976 58 + TSS region transcription start site region 30209
Tssr30210 3 90514984 to 90514998 14 + TSS region transcription start site region 30210