Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:88532861-88572958

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi13383 3 88531248 to 88533374 2126 CpG island CpG island 13383
Mex3a 3 88532395 to 88541394 8999 + protein coding gene mex3 RNA binding family member A
Cpgi13384 3 88536119 to 88537115 996 CpG island CpG island 13384
Mir1905 3 88536301 to 88536382 81 - miRNA gene microRNA 1905
Tssr29959 3 88537330 to 88537338 8 + TSS region transcription start site region 29959
Tssr29960 3 88537364 to 88537377 13 + TSS region transcription start site region 29960
Rab25 3 88542029 to 88548279 6250 - protein coding gene RAB25, member RAS oncogene family
Tssr34047 3 88548264 to 88548311 47 - TSS region transcription start site region 34047
Lamtor2 3 88549819 to 88552927 3108 - protein coding gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 2
Cpgi13385 3 88552389 to 88554422 2033 CpG island CpG island 13385
Tssr34048 3 88552843 to 88552855 12 - TSS region transcription start site region 34048
Tssr34049 3 88552861 to 88552958 97 - TSS region transcription start site region 34049
Tssr934 3 88553707 to 88553736 29 + TSS region transcription start site region 934
Tssr29961 3 88553754 to 88553806 52 + TSS region transcription start site region 29961
Ubqln4 3 88553758 to 88569725 15967 + protein coding gene ubiquilin 4
Tssr34050 3 88554445 to 88554460 15 - TSS region transcription start site region 34050
Tssr29962 3 88563184 to 88563221 37 + TSS region transcription start site region 29962
Tssr935 3 88563763 to 88563801 38 + TSS region transcription start site region 935
Tssr29963 3 88564447 to 88564459 12 + TSS region transcription start site region 29963
Tssr29964 3 88568238 to 88568265 27 + TSS region transcription start site region 29964
Tssr34051 3 88570464 to 88570481 17 - TSS region transcription start site region 34051
Tssr34052 3 88570483 to 88570495 12 - TSS region transcription start site region 34052
Tssr34053 3 88570527 to 88570532 5 - TSS region transcription start site region 34053
Tssr29965 3 88570598 to 88570637 39 + TSS region transcription start site region 29965
Tssr34054 3 88571856 to 88571863 7 - TSS region transcription start site region 34054
Tssr34055 3 88571888 to 88571899 11 - TSS region transcription start site region 34055