Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:88425302-88485311

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm33513 3 88425080 to 88428668 3588 + lncRNA gene predicted gene, 33513
Gm42814 3 88428936 to 88429395 459 + pseudogene predicted gene 42814
Sema4a 3 88435959 to 88461182 25223 - protein coding gene sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
Cpgi13377 3 88436606 to 88437150 544 CpG island CpG island 13377
Mir7011 3 88440879 to 88440951 72 - miRNA gene microRNA 7011
Tssr34015 3 88440999 to 88441006 7 - TSS region transcription start site region 34015
Tssr29949 3 88441105 to 88441136 31 + TSS region transcription start site region 29949
Tssr29950 3 88446791 to 88446805 14 + TSS region transcription start site region 29950
Tssr34016 3 88447179 to 88447184 5 - TSS region transcription start site region 34016
Tssr34017 3 88452368 to 88452401 33 - TSS region transcription start site region 34017
Tssr34018 3 88453388 to 88453401 13 - TSS region transcription start site region 34018
Tssr34019 3 88453405 to 88453412 7 - TSS region transcription start site region 34019
Tssr34020 3 88453419 to 88453426 7 - TSS region transcription start site region 34020
Tssr34021 3 88453473 to 88453479 6 - TSS region transcription start site region 34021
Tssr34022 3 88454820 to 88454831 11 - TSS region transcription start site region 34022
Tssr34023 3 88454832 to 88454853 21 - TSS region transcription start site region 34023
Tssr932 3 88454878 to 88454887 9 - TSS region transcription start site region 932
Tssr29951 3 88454951 to 88454968 17 + TSS region transcription start site region 29951
Tssr34024 3 88455142 to 88455166 24 - TSS region transcription start site region 34024
Tssr34025 3 88455173 to 88455192 19 - TSS region transcription start site region 34025
Tssr34026 3 88455302 to 88455311 9 - TSS region transcription start site region 34026
Tssr34027 3 88455330 to 88455347 17 - TSS region transcription start site region 34027
Tssr34028 3 88455692 to 88455707 15 - TSS region transcription start site region 34028
Tssr34029 3 88455726 to 88455733 7 - TSS region transcription start site region 34029
Tssr34030 3 88455735 to 88455788 53 - TSS region transcription start site region 34030
Tssr34031 3 88456397 to 88456441 44 - TSS region transcription start site region 34031
Tssr34032 3 88458852 to 88458899 47 - TSS region transcription start site region 34032
Tssr34033 3 88459021 to 88459043 22 - TSS region transcription start site region 34033
Tssr34034 3 88459047 to 88459074 27 - TSS region transcription start site region 34034
Tssr34035 3 88461196 to 88461226 30 - TSS region transcription start site region 34035
Tssr34036 3 88461303 to 88461314 11 - TSS region transcription start site region 34036
Gm40089 3 88462094 to 88466135 4041 - lncRNA gene predicted gene, 40089
Gm5979 3 88474584 to 88475154 570 + pseudogene predicted gene 5979
Lmna 3 88481148 to 88509932 28784 - protein coding gene lamin A
Tssr34037 3 88481907 to 88481915 8 - TSS region transcription start site region 34037
Cpgi13378 3 88482407 to 88482587 180 CpG island CpG island 13378
Tssr29952 3 88483332 to 88483382 50 + TSS region transcription start site region 29952
Cpgi13379 3 88484553 to 88485222 669 CpG island CpG island 13379