Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:88403936-88454395

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pmf1 3 88394143 to 88410331 16188 - protein coding gene polyamine-modulated factor 1
Cpgi13375 3 88409801 to 88410432 631 CpG island CpG island 13375
Tssr34010 3 88410067 to 88410094 27 - TSS region transcription start site region 34010
Tssr34011 3 88410295 to 88410351 56 - TSS region transcription start site region 34011
Tssr34012 3 88410365 to 88410370 5 - TSS region transcription start site region 34012
Tssr34013 3 88410377 to 88410388 11 - TSS region transcription start site region 34013
Slc25a44 3 88410498 to 88425139 14641 - protein coding gene solute carrier family 25, member 44
Cpgi13376 3 88424752 to 88425243 491 CpG island CpG island 13376
Tssr29948 3 88424794 to 88424800 6 + TSS region transcription start site region 29948
Gm33513 3 88425080 to 88428668 3588 + lncRNA gene predicted gene, 33513
Tssr34014 3 88425094 to 88425139 45 - TSS region transcription start site region 34014
Gm42814 3 88428936 to 88429395 459 + pseudogene predicted gene 42814
Sema4a 3 88435959 to 88461182 25223 - protein coding gene sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
Cpgi13377 3 88436606 to 88437150 544 CpG island CpG island 13377
Mir7011 3 88440879 to 88440951 72 - miRNA gene microRNA 7011
Tssr34015 3 88440999 to 88441006 7 - TSS region transcription start site region 34015
Tssr29949 3 88441105 to 88441136 31 + TSS region transcription start site region 29949
Tssr29950 3 88446791 to 88446805 14 + TSS region transcription start site region 29950
Tssr34016 3 88447179 to 88447184 5 - TSS region transcription start site region 34016
Tssr34017 3 88452368 to 88452401 33 - TSS region transcription start site region 34017
Tssr34018 3 88453388 to 88453401 13 - TSS region transcription start site region 34018
Tssr34019 3 88453405 to 88453412 7 - TSS region transcription start site region 34019
Tssr34020 3 88453419 to 88453426 7 - TSS region transcription start site region 34020
Tssr34021 3 88453473 to 88453479 6 - TSS region transcription start site region 34021