MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:88390498-88445139

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pmf1	3	88394143 to 88410331	16188	-	protein coding gene	polyamine-modulated factor 1
Tssr34009	3	88395954 to 88395998	44	-	TSS region	transcription start site region 34009
Cpgi13375	3	88409801 to 88410432	631		CpG island	CpG island 13375
Tssr34010	3	88410067 to 88410094	27	-	TSS region	transcription start site region 34010
Tssr34011	3	88410295 to 88410351	56	-	TSS region	transcription start site region 34011
Tssr34012	3	88410365 to 88410370	5	-	TSS region	transcription start site region 34012
Tssr34013	3	88410377 to 88410388	11	-	TSS region	transcription start site region 34013
Slc25a44	3	88410498 to 88425139	14641	-	protein coding gene	solute carrier family 25, member 44
Cpgi13376	3	88424752 to 88425243	491		CpG island	CpG island 13376
Tssr29948	3	88424794 to 88424800	6	+	TSS region	transcription start site region 29948
Gm33513	3	88425080 to 88428668	3588	+	lncRNA gene	predicted gene, 33513
Tssr34014	3	88425094 to 88425139	45	-	TSS region	transcription start site region 34014
Gm42814	3	88428936 to 88429395	459	+	pseudogene	predicted gene 42814
Sema4a	3	88435959 to 88461182	25223	-	protein coding gene	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
Cpgi13377	3	88436606 to 88437150	544		CpG island	CpG island 13377
Mir7011	3	88440879 to 88440951	72	-	miRNA gene	microRNA 7011
Tssr34015	3	88440999 to 88441006	7	-	TSS region	transcription start site region 34015
Tssr29949	3	88441105 to 88441136	31	+	TSS region	transcription start site region 29949