MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:88359730-88379735

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12 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Smg5	3	88336260 to 88362337	26077	+	protein coding gene	Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)
Cpgi13373	3	88364482 to 88364723	241		CpG island	CpG island 13373
Tssr29947	3	88364548 to 88364606	58	+	TSS region	transcription start site region 29947
Paqr6	3	88364584 to 88368541	3957	+	protein coding gene	progestin and adipoQ receptor family member VI
Cpgi13374	3	88365713 to 88366378	665		CpG island	CpG island 13374
Bglap3	3	88368616 to 88372741	4125	-	protein coding gene	bone gamma-carboxyglutamate protein 3
Tssr34005	3	88369730 to 88369735	5	-	TSS region	transcription start site region 34005
Tssr34006	3	88372740 to 88372745	5	-	TSS region	transcription start site region 34006
Gm21956	3	88376023 to 88377075	1052	+	pseudogene	predicted gene, 21956
Bglap2	3	88377736 to 88378699	963	-	protein coding gene	bone gamma-carboxyglutamate protein 2
Del(3Bglap2-Bglap)1Vari	3	88377736 to 88384464	6728		cytogenetic marker	deletion, Chr3, Bart Williams
Tssr34007	3	88378740 to 88378753	13	-	TSS region	transcription start site region 34007