MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:84975182-85416447

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Fbxw7	3	84815268 to 84979198	163930	+	protein coding gene	F-box and WD-40 domain protein 7
Tssr29761	3	84977566 to 84977595	29	+	TSS region	transcription start site region 29761
Tssr29762	3	84977946 to 84977961	15	+	TSS region	transcription start site region 29762
Tssr29763	3	84978129 to 84978133	4	+	TSS region	transcription start site region 29763
Gm30944	3	85021687 to 85028574	6887	+	lncRNA gene	predicted gene, 30944
Tssr33880	3	85037954 to 85037956	2	-	TSS region	transcription start site region 33880
Gm30991	3	85049140 to 85107896	58756	+	lncRNA gene	predicted gene, 30991
Gm31096	3	85114984 to 85122505	7521	-	lncRNA gene	predicted gene, 31096
Gm38041	3	85152036 to 85152696	660	-	pseudogene	predicted gene, 38041
Cpgi13318	3	85186652 to 85186964	312		CpG island	CpG island 13318
Gm38313	3	85195182 to 85196447	1265	-	unclassified gene	predicted gene, 38313
Cpgi13319	3	85280539 to 85280824	285		CpG island	CpG island 13319
D3Mit281	3	85284759 to 85284876	117		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 281
1700036G14Rik	3	85317519 to 85332027	14508	+	antisense lncRNA gene	RIKEN cDNA 1700036G14 gene
Gm31210	3	85342121 to 85343407	1286	+	lncRNA gene	predicted gene, 31210
Gm31359	3	85391545 to 85402099	10554	-	lncRNA gene	predicted gene, 31359
Gm42813	3	85397524 to 85428128	30604	-	lincRNA gene	predicted gene 42813
D3Mit73	3	85399196 to 85399341	145		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 73
Gm31304	3	85405628 to 85410345	4717	+	lncRNA gene	predicted gene, 31304