MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:69783428-70023525

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm19055	3	69808464 to 69809024	560	-	pseudogene	predicted gene, 19055
Sptssb	3	69819538 to 69859894	40356	-	protein coding gene	serine palmitoyltransferase, small subunit B
Tssr33557	3	69858870 to 69858874	4	-	TSS region	transcription start site region 33557
Tssr903	3	69859855 to 69859864	9	-	TSS region	transcription start site region 903
Tssr33558	3	69859875 to 69859901	26	-	TSS region	transcription start site region 33558
Cpgi13263	3	69860207 to 69861421	1214		CpG island	CpG island 13263
Tssr33559	3	69861374 to 69861395	21	-	TSS region	transcription start site region 33559
Gm35817	3	69882471 to 69884114	1643	+	lncRNA gene	predicted gene, 35817
D3Mit277	3	69903428 to 69903525	97		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 277
Gm17895	3	69954809 to 69955682	873	-	pseudogene	predicted gene, 17895
Gm23484	3	69962315 to 69962445	130	-	snoRNA gene	predicted gene, 23484
Tssr29549	3	69963152 to 69963160	8	+	TSS region	transcription start site region 29549
Gm37784	3	69963282 to 69963470	188	+	pseudogene	predicted gene, 37784
Otol1	3	70007613 to 70028708	21095	+	protein coding gene	otolin 1
Tssr29550	3	70007640 to 70007644	4	+	TSS region	transcription start site region 29550
Tssr29551	3	70007647 to 70007656	9	+	TSS region	transcription start site region 29551
Tssr29552	3	70007668 to 70007679	11	+	TSS region	transcription start site region 29552
Tssr29553	3	70007684 to 70007694	10	+	TSS region	transcription start site region 29553
Nhdlq17	3	70015850 to 70015850	0		QTL	non-HDL QTL 17