MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:57716062-57855233

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm6394	3	57717813 to 57718289	476	-	pseudogene	predicted gene 6394
Tssr33338	3	57718303 to 57718320	17	-	TSS region	transcription start site region 33338
Cpgi13198	3	57735523 to 57736454	931		CpG island	CpG island 13198
Tssr29188	3	57736056 to 57736128	72	+	TSS region	transcription start site region 29188
Rnf13	3	57736062 to 57835233	99171	+	protein coding gene	ring finger protein 13
Gm9645	3	57765864 to 57766655	791	-	pseudogene	predicted gene 9645
Tssr29189	3	57779453 to 57779468	15	+	TSS region	transcription start site region 29189
Tssr29190	3	57796197 to 57796217	20	+	TSS region	transcription start site region 29190
Tssr29191	3	57807017 to 57807031	14	+	TSS region	transcription start site region 29191
Gm17951	3	57809762 to 57810257	495	-	pseudogene	predicted gene, 17951
D530035G10Rik	3	57821585 to 57822402	817		unclassified gene	RIKEN cDNA D530035G10 gene
Tssr29192	3	57833852 to 57833882	30	+	TSS region	transcription start site region 29192
Pfn2	3	57841895 to 57847757	5862	-	protein coding gene	profilin 2
Tssr33339	3	57842636 to 57842652	16	-	TSS region	transcription start site region 33339
Cpgi13199	3	57846836 to 57848273	1437		CpG island	CpG island 13199
Tssr33340	3	57847478 to 57847610	132	-	TSS region	transcription start site region 33340
Tssr33341	3	57847690 to 57847720	30	-	TSS region	transcription start site region 33341
Tssr33342	3	57847724 to 57847835	111	-	TSS region	transcription start site region 33342
Tssr33343	3	57848080 to 57848098	18	-	TSS region	transcription start site region 33343