Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:55781782-56131913

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr29174 3 55782500 to 55782521 21 + TSS region transcription start site region 29174
Mab21l1 3 55782510 to 55785001 2491 + protein coding gene mab-21-like 1
Tssr29175 3 55782530 to 55782549 19 + TSS region transcription start site region 29175
Cpgi13191 3 55782618 to 55784123 1505 CpG island CpG island 13191
Tssr29176 3 55783382 to 55783404 22 + TSS region transcription start site region 29176
Tssr33301 3 55783470 to 55783492 22 - TSS region transcription start site region 33301
Tssr33302 3 55784340 to 55784352 12 - TSS region transcription start site region 33302
Cpgi13192 3 55787508 to 55788114 606 CpG island CpG island 13192
Tssr33303 3 55788745 to 55788749 4 - TSS region transcription start site region 33303
Tssr33304 3 55792416 to 55792437 21 - TSS region transcription start site region 33304
6720451E02Rik 3 55833671 to 55834459 788 unclassified gene RIKEN cDNA 6720451E02 gene
4933417G07Rik 3 55847105 to 55848065 960 + pseudogene RIKEN cDNA 4933417G07 gene
B230206L23Rik 3 55855247 to 55856151 904 unclassified gene RIKEN cDNA B230206L23 gene
Gm31914 3 55883268 to 56000320 117052 + lncRNA gene predicted gene, 31914
Tssr29177 3 55890302 to 55890313 11 + TSS region transcription start site region 29177
Gm43376 3 55890306 to 55936699 46393 + antisense lncRNA gene predicted gene 43376
D3Dcr4 3 55943611 to 55943719 108 DNA segment DNA Segment, Chr 3, Derry C. Roopenian 4
Gm22784 3 55956782 to 55956913 131 - snoRNA gene predicted gene, 22784
D3Dcr5 3 55986213 to 55986311 98 DNA segment DNA Segment, Chr 3, Derry C. Roopenian 5
Gm42840 3 56014918 to 56017168 2250 - unclassified gene predicted gene 42840
Tssr33305 3 56045809 to 56045813 4 - TSS region transcription start site region 33305
Tssr33306 3 56059293 to 56059306 13 - TSS region transcription start site region 33306
Gm42842 3 56123156 to 56126159 3003 - unclassified gene predicted gene 42842
Gm42841 3 56128596 to 56130527 1931 - unclassified gene predicted gene 42841