Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:54787068-55025887

Filter by:
20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smad9 3 54755582 to 54801257 45675 + protein coding gene SMAD family member 9
D3Mit135.1 3 54791152 to 54791279 127 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 135.1
D3Mit135 3 54791327 to 54791454 127 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 135
Cpgi13178 3 54797380 to 54797774 394 CpG island CpG island 13178
Rfxap 3 54803115 to 54807791 4676 - protein coding gene regulatory factor X-associated protein
Cpgi13179 3 54807046 to 54808397 1351 CpG island CpG island 13179
Tssr33283 3 54807737 to 54807746 9 - TSS region transcription start site region 33283
Tssr33284 3 54807752 to 54807768 16 - TSS region transcription start site region 33284
Tssr33285 3 54807770 to 54807804 34 - TSS region transcription start site region 33285
Tssr33286 3 54807816 to 54807827 11 - TSS region transcription start site region 33286
Gm10254 3 54810384 to 54811250 866 - pseudogene predicted gene 10254
Cpgi13180 3 54811189 to 54811454 265 CpG island CpG island 13180
Tssr33287 3 54811402 to 54811404 2 - TSS region transcription start site region 33287
Sertm1 3 54897068 to 54915887 18819 - protein coding gene serine rich and transmembrane domain containing 1
Cpgi13181 3 54899375 to 54899791 416 CpG island CpG island 13181
Cpgi13182 3 54915402 to 54916167 765 CpG island CpG island 13182
Tssr33288 3 54915814 to 54915827 13 - TSS region transcription start site region 33288
Tssr33289 3 54915867 to 54915884 17 - TSS region transcription start site region 33289
Tssr33290 3 54915985 to 54916021 36 - TSS region transcription start site region 33290
Gm31358 3 54916019 to 54953257 37238 + lncRNA gene predicted gene, 31358