Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:54531439-54734627

Filter by:
23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm31154 3 54488563 to 54534891 46328 - lncRNA gene predicted gene, 31154
Tssr29130 3 54569897 to 54569917 20 + TSS region transcription start site region 29130
Gm40050 3 54590551 to 54601388 10837 - lncRNA gene predicted gene, 40050
Gm26678 3 54631439 to 54634627 3188 + lincRNA gene predicted gene, 26678
B020017C02Rik 3 54632881 to 54633963 1082 - pseudogene RIKEN cDNA B020017C02 gene
Cpgi13170 3 54633128 to 54633759 631 CpG island CpG island 13170
Cpgi13171 3 54634272 to 54634440 168 CpG island CpG island 13171
Tssr33279 3 54634626 to 54634629 3 - TSS region transcription start site region 33279
Tssr33280 3 54686753 to 54686780 27 - TSS region transcription start site region 33280
Tssr33281 3 54686808 to 54686821 13 - TSS region transcription start site region 33281
Cpgi13172 3 54692349 to 54693187 838 CpG island CpG island 13172
Tssr29131 3 54692775 to 54692800 25 + TSS region transcription start site region 29131
Tssr29132 3 54692805 to 54692836 31 + TSS region transcription start site region 29132
Supt20 3 54692807 to 54728766 35959 + protein coding gene suppressor of Ty 20
Tssr29133 3 54692849 to 54692868 19 + TSS region transcription start site region 29133
Tssr29134 3 54692883 to 54692892 9 + TSS region transcription start site region 29134
Tssr29135 3 54693034 to 54693055 21 + TSS region transcription start site region 29135
Tssr29136 3 54693059 to 54693079 20 + TSS region transcription start site region 29136
Tssr29137 3 54693088 to 54693101 13 + TSS region transcription start site region 29137
Gm21958 3 54713176 to 54714353 1177 - protein coding gene predicted gene, 21958
Tssr29138 3 54717564 to 54717596 32 + TSS region transcription start site region 29138
Exosc8 3 54728679 to 54735364 6685 - protein coding gene exosome component 8
Cpgi13173 3 54734367 to 54735954 1587 CpG island CpG island 13173