MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:34768475-35458483

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm38509	3	34772075 to 34782346	10271	+	lincRNA gene	predicted gene, 38509
Tssr28838	3	34784126 to 34784131	5	+	TSS region	transcription start site region 28838
Tssr28839	3	34826605 to 34826646	41	+	TSS region	transcription start site region 28839
Tssr28840	3	34826651 to 34826658	7	+	TSS region	transcription start site region 28840
Tssr28841	3	34826666 to 34826671	5	+	TSS region	transcription start site region 28841
Gm21388	3	34826669 to 34879283	52614	+	lincRNA gene	predicted gene, 21388
Tssr32990	3	34861249 to 34861262	13	-	TSS region	transcription start site region 32990
D3Mit223	3	34913882 to 34914025	143		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 223
Mir6378	3	34922545 to 34922651	106	-	miRNA gene	microRNA 6378
Gm35255	3	34950227 to 34959531	9304	+	lncRNA gene	predicted gene, 35255
D3Mit331	3	34960436 to 34960547	111		DNA segment	DNA Segment, Chr 3 Massachusetts Institute of Technology 331
Tssr28842	3	35113475 to 35113483	8	+	TSS region	transcription start site region 28842
Tssr28843	3	35113503 to 35113517	14	+	TSS region	transcription start site region 28843
Tgq13	3	35234019 to 35234019	0		QTL	triglyceride QTL 13
1700017M07Rik	3	35256462 to 35276131	19669	-	lincRNA gene	RIKEN cDNA 1700017M07 gene
Gm35425	3	35318437 to 35330114	11677	+	lncRNA gene	predicted gene, 35425
Gm25442	3	35325614 to 35325705	91	+	miRNA gene	predicted gene, 25442
Gm38512	3	35337700 to 35405950	68250	-	lncRNA gene	predicted gene, 38512
Gm43078	3	35413833 to 35414000	167	+	unclassified gene	predicted gene 43078