MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:34664316-34704320

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9 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sox2ot	3	34560381 to 34677993	117612	+	lncRNA gene	SOX2 overlapping transcript (non-protein coding)
Cpgi13074	3	34662821 to 34664739	1918		CpG island	CpG island 13074
Gm43206	3	34682633 to 34682746	113	+	unclassified gene	predicted gene 43206
Tssr28829	3	34684316 to 34684320	4	+	TSS region	transcription start site region 28829
Gm34941	3	34689378 to 34692921	3543	+	lncRNA gene	predicted gene, 34941
Cpgi13075	3	34692205 to 34692641	436		CpG island	CpG island 13075
Tssr32983	3	34699450 to 34699456	6	-	TSS region	transcription start site region 32983
Gm3143	3	34699640 to 34716662	17022	-	lincRNA gene	predicted gene 3143
Tssr28830	3	34699945 to 34699947	2	+	TSS region	transcription start site region 28830