Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:30599855-30799872

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Actrt3 3 30597073 to 30599870 2797 - protein coding gene actin related protein T3
Cpgi13038 3 30599632 to 30599989 357 CpG island CpG island 13038
Tssr32898 3 30599863 to 30599886 23 - TSS region transcription start site region 32898
n-TVaac8 3 30601270 to 30601342 72 + tRNA gene nuclear encoded tRNA valine 8 (anticodon AAC)
Tssr28679 3 30602056 to 30602096 40 + TSS region transcription start site region 28679
Mynn 3 30602087 to 30619873 17786 + protein coding gene myoneurin
Cpgi13039 3 30602219 to 30603116 897 CpG island CpG island 13039
Tssr28680 3 30602617 to 30602653 36 + TSS region transcription start site region 28680
Lrrc34 3 30624267 to 30647818 23551 - protein coding gene leucine rich repeat containing 34
Lrriq4 3 30644507 to 30672431 27924 + protein coding gene leucine-rich repeats and IQ motif containing 4
Cpgi13040 3 30647537 to 30647863 326 CpG island CpG island 13040
Tssr32899 3 30647752 to 30647770 18 - TSS region transcription start site region 32899
Tssr32900 3 30647779 to 30647782 3 - TSS region transcription start site region 32900
Tssr32901 3 30647793 to 30647876 83 - TSS region transcription start site region 32901
Tssr28681 3 30647923 to 30647934 11 + TSS region transcription start site region 28681
Tssr28682 3 30647958 to 30647977 19 + TSS region transcription start site region 28682
Tssr28683 3 30647993 to 30648007 14 + TSS region transcription start site region 28683
Cpgi13041 3 30650106 to 30650991 885 CpG island CpG island 13041
Lrrc31 3 30679058 to 30699843 20785 - protein coding gene leucine rich repeat containing 31
Gm15462 3 30686085 to 30692366 6281 + antisense lncRNA gene predicted gene 15462
Tssr32902 3 30699765 to 30699803 38 - TSS region transcription start site region 32902
Tssr32903 3 30699855 to 30699872 17 - TSS region transcription start site region 32903
Cpgi13042 3 30701363 to 30701729 366 CpG island CpG island 13042
Tssr28684 3 30732349 to 30732351 2 + TSS region transcription start site region 28684
Tssr28685 3 30746210 to 30746235 25 + TSS region transcription start site region 28685
Samd7 3 30746293 to 30767174 20881 + protein coding gene sterile alpha motif domain containing 7
Tssr28686 3 30746325 to 30746341 16 + TSS region transcription start site region 28686
Gm33590 3 30752309 to 30756654 4345 - lncRNA gene predicted gene, 33590
Tssr28687 3 30791900 to 30791903 3 + TSS region transcription start site region 28687
4933429H19Rik 3 30792570 to 30793564 994 - antisense lncRNA gene RIKEN cDNA 4933429H19 gene
Cpgi13043 3 30792754 to 30794089 1335 CpG island CpG island 13043
Sec62 3 30792875 to 30821263 28388 + protein coding gene SEC62 homolog (S. cerevisiae)
Tssr28688 3 30793033 to 30793067 34 + TSS region transcription start site region 28688
Tssr28689 3 30793081 to 30793098 17 + TSS region transcription start site region 28689
Tssr28690 3 30793128 to 30793147 19 + TSS region transcription start site region 28690
Tssr32904 3 30793205 to 30793232 27 - TSS region transcription start site region 32904
Tssr28691 3 30793301 to 30793353 52 + TSS region transcription start site region 28691
Tssr32905 3 30793549 to 30793595 46 - TSS region transcription start site region 32905