Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:152143833-152243842

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gipc2 3 152093839 to 152165900 72061 - protein coding gene GIPC PDZ domain containing family, member 2
Tssr1099 3 152147377 to 152147386 9 + TSS region transcription start site region 1099
Gm16198 3 152153447 to 152154116 669 + pseudogene predicted gene 16198
Cpgi13942 3 152165347 to 152166255 908 CpG island CpG island 13942
D630002J18Rik 3 152165374 to 152166488 1114 + protein coding gene RIKEN cDNA D630002J18 gene
Tssr36161 3 152165879 to 152165966 87 - TSS region transcription start site region 36161
Cpgi13943 3 152167180 to 152167442 262 CpG island CpG island 13943
Tssr36162 3 152176352 to 152176380 28 - TSS region transcription start site region 36162
Dnajb4 3 152183871 to 152210328 26457 - protein coding gene DnaJ heat shock protein family (Hsp40) member B4
Cpgi13944 3 152193701 to 152193972 271 CpG island CpG island 13944
Tssr36163 3 152193723 to 152193734 11 - TSS region transcription start site region 36163
Tssr36164 3 152193747 to 152193768 21 - TSS region transcription start site region 36164
Tssr36165 3 152193773 to 152193797 24 - TSS region transcription start site region 36165
Tssr36166 3 152193803 to 152193831 28 - TSS region transcription start site region 36166
Tssr36167 3 152193833 to 152193842 9 - TSS region transcription start site region 36167
Gm40180 3 152197571 to 152204579 7008 + lncRNA gene predicted gene, 40180
Cpgi13945 3 152209750 to 152211551 1801 CpG island CpG island 13945
Tssr32396 3 152209899 to 152209928 29 + TSS region transcription start site region 32396
Tssr36168 3 152210017 to 152210028 11 - TSS region transcription start site region 36168
Tssr36169 3 152210032 to 152210123 91 - TSS region transcription start site region 36169
Tssr36170 3 152210267 to 152210320 53 - TSS region transcription start site region 36170
Fubp1 3 152210427 to 152236830 26403 + protein coding gene far upstream element (FUSE) binding protein 1
Tssr32397 3 152210454 to 152210465 11 + TSS region transcription start site region 32397
Tssr32398 3 152210469 to 152210534 65 + TSS region transcription start site region 32398
Tssr32399 3 152214285 to 152214290 5 + TSS region transcription start site region 32399
Tssr32400 3 152215437 to 152215449 12 + TSS region transcription start site region 32400
Tssr32401 3 152226143 to 152226162 19 + TSS region transcription start site region 32401
Tssr32402 3 152231967 to 152231984 17 + TSS region transcription start site region 32402
Tssr32403 3 152234794 to 152234800 6 + TSS region transcription start site region 32403
Nexn 3 152236982 to 152266350 29368 - protein coding gene nexilin
Tssr36171 3 152241048 to 152241050 2 - TSS region transcription start site region 36171
Tssr36172 3 152242805 to 152242819 14 - TSS region transcription start site region 36172