Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:122412999-122613049

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi13768 3 122419553 to 122420603 1050 CpG island CpG island 13768
Tssr31494 3 122419739 to 122419754 15 + TSS region transcription start site region 31494
Tssr31495 3 122419772 to 122419787 15 + TSS region transcription start site region 31495
Bcar3 3 122419780 to 122530191 110411 + protein coding gene breast cancer anti-estrogen resistance 3
Tssr31496 3 122419793 to 122419806 13 + TSS region transcription start site region 31496
Tssr31497 3 122419866 to 122419872 6 + TSS region transcription start site region 31497
Tssr31498 3 122419985 to 122420000 15 + TSS region transcription start site region 31498
Gm42836 3 122426443 to 122459060 32617 - antisense lncRNA gene predicted gene 42836
Gm25153 3 122464727 to 122464882 155 + snRNA gene predicted gene, 25153
Gm34349 3 122476461 to 122483094 6633 - lncRNA gene predicted gene, 34349
Tssr31499 3 122483771 to 122483794 23 + TSS region transcription start site region 31499
Tssr31500 3 122504659 to 122504666 7 + TSS region transcription start site region 31500
Cpgi13769 3 122508015 to 122508455 440 CpG island CpG island 13769
Tssr31501 3 122510878 to 122510882 4 + TSS region transcription start site region 31501
Tssr31502 3 122511199 to 122511220 21 + TSS region transcription start site region 31502
Tssr31503 3 122511272 to 122511284 12 + TSS region transcription start site region 31503
Tssr31504 3 122511955 to 122511958 3 + TSS region transcription start site region 31504
Tssr31505 3 122512170 to 122512206 36 + TSS region transcription start site region 31505
Tssr35450 3 122512999 to 122513049 50 - TSS region transcription start site region 35450
Fnbp1l 3 122538719 to 122619714 80995 - protein coding gene formin binding protein 1-like
Tssr35451 3 122539544 to 122539549 5 - TSS region transcription start site region 35451
Mir7657 3 122541625 to 122541681 56 - miRNA gene microRNA 7657
Tssr35452 3 122551534 to 122551541 7 - TSS region transcription start site region 35452
Tssr35453 3 122552338 to 122552341 3 - TSS region transcription start site region 35453
Tssr35454 3 122559099 to 122559116 17 - TSS region transcription start site region 35454
Gm43569 3 122565050 to 122574740 9690 + antisense lncRNA gene predicted gene 43569
Tssr31506 3 122566719 to 122566739 20 + TSS region transcription start site region 31506
Tssr35455 3 122568785 to 122568808 23 - TSS region transcription start site region 35455
Tssr35456 3 122569710 to 122569749 39 - TSS region transcription start site region 35456
Gm42994 3 122574524 to 122577072 2548 - unclassified gene predicted gene 42994
Tssr35457 3 122590198 to 122590211 13 - TSS region transcription start site region 35457
Tssr35458 3 122612221 to 122612226 5 - TSS region transcription start site region 35458