Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:122319553-122520603

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40139 3 122321663 to 122331659 9996 + lncRNA gene predicted gene, 40139
Tssr35445 3 122372813 to 122372853 40 - TSS region transcription start site region 35445
Gm4610 3 122377097 to 122391811 14714 - antisense lncRNA gene predicted gene 4610
Tssr35446 3 122391227 to 122391267 40 - TSS region transcription start site region 35446
Tssr35447 3 122391842 to 122391862 20 - TSS region transcription start site region 35447
Tssr35448 3 122391993 to 122391998 5 - TSS region transcription start site region 35448
Cfq3 3 122395162 to 127426367 5031205 QTL conditioned fear QTL 3
Tssr35449 3 122408830 to 122408847 17 - TSS region transcription start site region 35449
Cpgi13768 3 122419553 to 122420603 1050 CpG island CpG island 13768
Tssr31494 3 122419739 to 122419754 15 + TSS region transcription start site region 31494
Tssr31495 3 122419772 to 122419787 15 + TSS region transcription start site region 31495
Bcar3 3 122419780 to 122530191 110411 + protein coding gene breast cancer anti-estrogen resistance 3
Tssr31496 3 122419793 to 122419806 13 + TSS region transcription start site region 31496
Tssr31497 3 122419866 to 122419872 6 + TSS region transcription start site region 31497
Tssr31498 3 122419985 to 122420000 15 + TSS region transcription start site region 31498
Gm42836 3 122426443 to 122459060 32617 - antisense lncRNA gene predicted gene 42836
Gm25153 3 122464727 to 122464882 155 + snRNA gene predicted gene, 25153
Gm34349 3 122476461 to 122483094 6633 - lncRNA gene predicted gene, 34349
Tssr31499 3 122483771 to 122483794 23 + TSS region transcription start site region 31499
Tssr31500 3 122504659 to 122504666 7 + TSS region transcription start site region 31500
Cpgi13769 3 122508015 to 122508455 440 CpG island CpG island 13769
Tssr31501 3 122510878 to 122510882 4 + TSS region transcription start site region 31501
Tssr31502 3 122511199 to 122511220 21 + TSS region transcription start site region 31502
Tssr31503 3 122511272 to 122511284 12 + TSS region transcription start site region 31503
Tssr31504 3 122511955 to 122511958 3 + TSS region transcription start site region 31504
Tssr31505 3 122512170 to 122512206 36 + TSS region transcription start site region 31505
Tssr35450 3 122512999 to 122513049 50 - TSS region transcription start site region 35450