Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:119825502-121365528

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm24744 3 119831937 to 119832057 120 + miRNA gene predicted gene, 24744
Gm26137 3 119837904 to 119838024 120 + miRNA gene predicted gene, 26137
D3Mit144 3 119844605 to 119844742 137 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 144
Tssr31427 3 119903349 to 119903362 13 + TSS region transcription start site region 31427
Gm18384 3 119968731 to 119969538 807 + pseudogene predicted gene, 18384
Tssr31428 3 119987532 to 119987533 1 + TSS region transcription start site region 31428
Gm23733 3 120317884 to 120317989 105 - snRNA gene predicted gene, 23733
Tssr31429 3 120356591 to 120356593 2 + TSS region transcription start site region 31429
Tssr31430 3 120595502 to 120595528 26 + TSS region transcription start site region 31430
Tssr31431 3 120595621 to 120595636 15 + TSS region transcription start site region 31431
6530403H02Rik 3 120604109 to 120886733 282624 - lincRNA gene RIKEN cDNA 6530403H02 gene
Gm25013 3 120609966 to 120610093 127 - snoRNA gene predicted gene, 25013
Mors2 3 120689010 to 120689134 124 QTL modifier of obesity related sterility 2
D3Mit316 3 120689010 to 120689134 124 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology 316
Gm42927 3 120735721 to 120739561 3840 - pseudogene predicted gene 42927
Tssr35394 3 120886728 to 120886746 18 - TSS region transcription start site region 35394
Gm40133 3 120932130 to 120934711 2581 - lncRNA gene predicted gene, 40133
Gm43444 3 121020486 to 121020776 290 - unclassified gene predicted gene 43444
Tssr31432 3 121021472 to 121021479 7 + TSS region transcription start site region 31432
Gm42926 3 121029086 to 121029782 696 - unclassified gene predicted gene 42926
Tssr31433 3 121070984 to 121070985 1 + TSS region transcription start site region 31433
Rwdd3 3 121155398 to 121171695 16297 - protein coding gene RWD domain containing 3
Tssr35395 3 121159223 to 121159232 9 - TSS region transcription start site region 35395
Gm10652 3 121168656 to 121171277 2621 + unclassified gene predicted gene 10652
Cpgi13754 3 121171283 to 121171878 595 CpG island CpG island 13754
Tssr35396 3 121171678 to 121171717 39 - TSS region transcription start site region 35396
Gm5710 3 121180103 to 121181097 994 - pseudogene predicted gene 5710
Tmem56 3 121202008 to 121283108 81100 - protein coding gene transmembrane protein 56
Tssr35397 3 121205479 to 121205484 5 - TSS region transcription start site region 35397
Tssr35398 3 121206332 to 121206364 32 - TSS region transcription start site region 35398
Tssr35399 3 121232423 to 121232435 12 - TSS region transcription start site region 35399
Tssr35400 3 121249965 to 121249966 1 - TSS region transcription start site region 35400
Gm9353 3 121250134 to 121250737 603 - pseudogene predicted gene 9353
Cpgi13755 3 121262093 to 121263506 1413 CpG island CpG island 13755
Tssr35401 3 121262871 to 121262922 51 - TSS region transcription start site region 35401
Tssr1032 3 121262927 to 121262942 15 - TSS region transcription start site region 1032
Tssr35402 3 121262951 to 121262969 18 - TSS region transcription start site region 35402
Tssr35403 3 121263158 to 121263174 16 - TSS region transcription start site region 35403
Tssr35404 3 121263243 to 121263252 9 - TSS region transcription start site region 35404
Tssr35405 3 121263297 to 121263310 13 - TSS region transcription start site region 35405
Tssr35406 3 121263314 to 121263347 33 - TSS region transcription start site region 35406
Tssr35407 3 121277128 to 121277142 14 - TSS region transcription start site region 35407
Tssr35408 3 121277185 to 121277198 13 - TSS region transcription start site region 35408
Gm30517 3 121277524 to 121278295 771 + pseudogene predicted gene, 30517
Tssr35409 3 121283017 to 121283030 13 - TSS region transcription start site region 35409
Tssr35410 3 121283051 to 121283058 7 - TSS region transcription start site region 35410
Tssr35411 3 121283096 to 121283103 7 - TSS region transcription start site region 35411
Cpgi13756 3 121291482 to 121292289 807 CpG island CpG island 13756
Tssr35412 3 121291598 to 121291614 16 - TSS region transcription start site region 35412
Tssr31434 3 121291725 to 121291817 92 + TSS region transcription start site region 31434
Alg14 3 121291773 to 121363094 71321 + protein coding gene asparagine-linked glycosylation 14
Tssr31435 3 121291821 to 121291832 11 + TSS region transcription start site region 31435
Tssr31436 3 121291851 to 121291862 11 + TSS region transcription start site region 31436
Tssr31437 3 121299330 to 121299334 4 + TSS region transcription start site region 31437
Gm26027 3 121337692 to 121337959 267 + unclassified non-coding RNA gene predicted gene, 26027
Tssr35413 3 121343327 to 121343337 10 - TSS region transcription start site region 35413
Tssr35414 3 121343356 to 121343371 15 - TSS region transcription start site region 35414
Gm33310 3 121353585 to 121361268 7683 + lncRNA gene predicted gene, 33310