Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:110194436-113424829

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D3Mit123 3 110220135 to 110220392 257 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 123
Gm42516 3 110243862 to 110244628 766 - unclassified gene predicted gene 42516
Prmt6 3 110246109 to 110250998 4889 - protein coding gene protein arginine N-methyltransferase 6
Cpgi13720 3 110249749 to 110251164 1415 CpG island CpG island 13720
C130013H08Rik 3 110250015 to 110253706 3691 + antisense lncRNA gene RIKEN cDNA C130013H08 gene
Tssr31306 3 110250143 to 110250178 35 + TSS region transcription start site region 31306
Tssr31307 3 110250183 to 110250204 21 + TSS region transcription start site region 31307
Tssr35241 3 110250963 to 110251015 52 - TSS region transcription start site region 35241
Tssr35242 3 110251368 to 110251381 13 - TSS region transcription start site region 35242
Gm43405 3 110277136 to 110277472 336 - pseudogene predicted gene 43405
Gm19185 3 110399131 to 110399773 642 + pseudogene predicted gene, 19185
Gm43406 3 110564068 to 110564401 333 - pseudogene predicted gene 43406
Gm26076 3 110564437 to 110564541 104 - snRNA gene predicted gene, 26076
Gm43404 3 110634323 to 110636856 2533 + unclassified gene predicted gene 43404
Gm43407 3 111108500 to 111108816 316 + pseudogene predicted gene 43407
Gm9314 3 111321330 to 111322857 1527 - pseudogene predicted gene 9314
D3Mit78 3 111363757 to 111363871 114 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 78
Gm42905 3 111789492 to 111791102 1610 + unclassified gene predicted gene 42905
Gm43854 3 111809436 to 111809829 393 - pseudogene predicted gene 43854
Gm6602 3 111881903 to 112082001 200098 + lincRNA gene predicted gene 6602
D3Mit106 3 112038301 to 112038464 163 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 106
Gm25519 3 112198915 to 112199041 126 - snoRNA gene predicted gene, 25519
Gm43853 3 112202715 to 112203015 300 - pseudogene predicted gene 43853
Tssr1023 3 112202870 to 112202871 1 + TSS region transcription start site region 1023
Gm4859 3 112302372 to 112303158 786 + pseudogene predicted gene 4859
Gm9317 3 112330911 to 112331772 861 - pseudogene predicted gene 9317
Tssr1024 3 112489211 to 112489217 6 + TSS region transcription start site region 1024
Gm42526 3 112591563 to 112591955 392 + pseudogene predicted gene 42526
Gm43587 3 112766809 to 112767012 203 - pseudogene predicted gene 43587
Utp14b-ps1 3 113019875 to 113022139 2264 + pseudogene UTP14B small subunit processome component, pseudogene 1
Gm5548 3 113053889 to 113054285 396 - pseudogene predicted pseudogene 5548
Gm38395 3 113055808 to 113056625 817 - pseudogene predicted gene, 38395
Amy2b 3 113147656 to 113156727 9071 - pseudogene amylase 2b
Tssr35243 3 113149370 to 113149388 18 - TSS region transcription start site region 35243
Tssr1025 3 113155620 to 113155629 9 - TSS region transcription start site region 1025
Tssr35244 3 113156742 to 113156762 20 - TSS region transcription start site region 35244
Tssr31308 3 113162559 to 113162565 6 + TSS region transcription start site region 31308
Amy2-ps1 3 113182249 to 113206697 24448 - pseudogene amylase 2, pseudogene 1
Tssr35245 3 113195082 to 113195105 23 - TSS region transcription start site region 35245
Tssr35246 3 113195106 to 113195112 6 - TSS region transcription start site region 35246
Tssr35247 3 113195161 to 113195191 30 - TSS region transcription start site region 35247
Tssr35248 3 113206694 to 113206698 4 - TSS region transcription start site region 35248
Amy2a5 3 113249178 to 113258699 9521 - protein coding gene amylase 2a5
Amy2a4 3 113279843 to 113291449 11606 - protein coding gene amylase 2a4
Amy2a3 3 113312455 to 113324052 11597 - protein coding gene amylase 2a3
Amy2a2 3 113345055 to 113356658 11603 - protein coding gene amylase 2a2