Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:108905644-109005655

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prpf38b 3 108902805 to 108911727 8922 - protein coding gene PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
Tssr35198 3 108906980 to 108906984 4 - TSS region transcription start site region 35198
Tssr35199 3 108907803 to 108907824 21 - TSS region transcription start site region 35199
Tssr35200 3 108908053 to 108908066 13 - TSS region transcription start site region 35200
Tssr35201 3 108908071 to 108908089 18 - TSS region transcription start site region 35201
Cpgi13711 3 108910748 to 108912050 1302 CpG island CpG island 13711
Tssr35202 3 108911452 to 108911492 40 - TSS region transcription start site region 35202
Tssr35203 3 108911670 to 108911684 14 - TSS region transcription start site region 35203
Tssr35204 3 108911687 to 108911746 59 - TSS region transcription start site region 35204
Tssr31269 3 108911806 to 108911824 18 + TSS region transcription start site region 31269
Tssr31270 3 108911828 to 108911856 28 + TSS region transcription start site region 31270
Tssr31271 3 108912413 to 108912422 9 + TSS region transcription start site region 31271
Henmt1 3 108939873 to 108960774 20901 + protein coding gene HEN1 methyltransferase homolog 1 (Arabidopsis)
Cpgi13712 3 108939926 to 108940815 889 CpG island CpG island 13712
Gm9857 3 108940053 to 108940445 392 - protein coding gene predicted gene 9857
Tssr31272 3 108940076 to 108940107 31 + TSS region transcription start site region 31272
Tssr31273 3 108940108 to 108940125 17 + TSS region transcription start site region 31273
Tssr35205 3 108955644 to 108955655 11 - TSS region transcription start site region 35205
Fam102b 3 108970997 to 109027607 56610 - protein coding gene family with sequence similarity 102, member B
Tssr35206 3 108972248 to 108972252 4 - TSS region transcription start site region 35206
Tssr35207 3 108972305 to 108972366 61 - TSS region transcription start site region 35207
Tssr35208 3 108972411 to 108972447 36 - TSS region transcription start site region 35208
Tssr35209 3 108972616 to 108972631 15 - TSS region transcription start site region 35209
Tssr35210 3 108972761 to 108972772 11 - TSS region transcription start site region 35210
Tssr35211 3 108972807 to 108972828 21 - TSS region transcription start site region 35211
Tssr35212 3 108973281 to 108973300 19 - TSS region transcription start site region 35212
Tssr35213 3 108976491 to 108976498 7 - TSS region transcription start site region 35213
Tssr35214 3 108976550 to 108976566 16 - TSS region transcription start site region 35214
Tssr35215 3 108976567 to 108976586 19 - TSS region transcription start site region 35215
Tssr35216 3 108976693 to 108976702 9 - TSS region transcription start site region 35216
Gm43221 3 109000024 to 109002094 2070 + antisense lncRNA gene predicted gene 43221