Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:106390025-106540034

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Chil6 3 106387384 to 106406182 18798 - protein coding gene chitinase-like 6
Tssr34958 3 106406090 to 106406110 20 - TSS region transcription start site region 34958
Tssr1000 3 106465025 to 106465034 9 + TSS region transcription start site region 1000
Gm10673 3 106478282 to 106480867 2585 protein coding gene predicted gene 10673
Gm38244 3 106478283 to 106480868 2585 + unclassified gene predicted gene, 38244
2010016I18Rik 3 106481986 to 106485913 3927 - lncRNA gene RIKEN cDNA 2010016I18 gene
Cpgi13665 3 106482285 to 106482899 614 CpG island CpG island 13665
Tssr31109 3 106482427 to 106482477 50 + TSS region transcription start site region 31109
Dennd2d 3 106482431 to 106503030 20599 + protein coding gene DENN/MADD domain containing 2D
Tssr31110 3 106482557 to 106482571 14 + TSS region transcription start site region 31110
Tssr31111 3 106482607 to 106482660 53 + TSS region transcription start site region 31111
Tssr34959 3 106483435 to 106483437 2 - TSS region transcription start site region 34959
Tssr34960 3 106485882 to 106485888 6 - TSS region transcription start site region 34960
Tssr34961 3 106485903 to 106485926 23 - TSS region transcription start site region 34961
Tssr34962 3 106485928 to 106485960 32 - TSS region transcription start site region 34962
Tssr31112 3 106486009 to 106486057 48 + TSS region transcription start site region 31112
Tssr31113 3 106486059 to 106486092 33 + TSS region transcription start site region 31113
Tssr34963 3 106486333 to 106486336 3 - TSS region transcription start site region 34963
Cept1 3 106502260 to 106547802 45542 - protein coding gene choline/ethanolaminephosphotransferase 1
9030425P06Rik 3 106506164 to 106510561 4397 unclassified non-coding RNA gene RIKEN cDNA 9030425P06 gene
Tssr34964 3 106511462 to 106511467 5 - TSS region transcription start site region 34964
Tssr34965 3 106513536 to 106513540 4 - TSS region transcription start site region 34965
Tssr34966 3 106514081 to 106514087 6 - TSS region transcription start site region 34966
Tssr34967 3 106516101 to 106516116 15 - TSS region transcription start site region 34967
Tssr34968 3 106516135 to 106516173 38 - TSS region transcription start site region 34968
Tssr34969 3 106516271 to 106516283 12 - TSS region transcription start site region 34969
Tssr34970 3 106517015 to 106517020 5 - TSS region transcription start site region 34970
Tssr34971 3 106521792 to 106521802 10 - TSS region transcription start site region 34971
Tssr34972 3 106525454 to 106525503 49 - TSS region transcription start site region 34972
Tssr34973 3 106528142 to 106528190 48 - TSS region transcription start site region 34973
Tssr34974 3 106528251 to 106528271 20 - TSS region transcription start site region 34974
Tssr34975 3 106529250 to 106529281 31 - TSS region transcription start site region 34975
Tssr34976 3 106539451 to 106539472 21 - TSS region transcription start site region 34976