Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:104825910-105006163

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Capza1 3 104822785 to 104864505 41720 - protein coding gene capping protein (actin filament) muscle Z-line, alpha 1
Gm42658 3 104826330 to 104827904 1574 - sense intronic lncRNA gene predicted gene 42658
Gm42659 3 104836430 to 104838183 1753 - sense intronic lncRNA gene predicted gene 42659
Tssr34902 3 104837286 to 104837290 4 - TSS region transcription start site region 34902
Tssr34903 3 104863818 to 104863828 10 - TSS region transcription start site region 34903
Tssr34904 3 104863868 to 104863871 3 - TSS region transcription start site region 34904
Tssr31064 3 104863981 to 104863986 5 + TSS region transcription start site region 31064
Cpgi13653 3 104864164 to 104865564 1400 CpG island CpG island 13653
Tssr34905 3 104864420 to 104864450 30 - TSS region transcription start site region 34905
Tssr31065 3 104864459 to 104864512 53 + TSS region transcription start site region 31065
St7l 3 104864506 to 104930064 65558 + protein coding gene suppression of tumorigenicity 7-like
Tssr34906 3 104864964 to 104865045 81 - TSS region transcription start site region 34906
Tssr31066 3 104865062 to 104865099 37 + TSS region transcription start site region 31066
Tssr34907 3 104865088 to 104865117 29 - TSS region transcription start site region 34907
Tssr31067 3 104908596 to 104908605 9 + TSS region transcription start site region 31067
Gm4525 3 104915910 to 104916163 253 - pseudogene predicted gene 4525
Tssr34908 3 104916194 to 104916196 2 - TSS region transcription start site region 34908
D3Mit214 3 104922346 to 104922495 149 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 214
Wnt2b 3 104945272 to 104961921 16649 - protein coding gene wingless-type MMTV integration site family, member 2B
Gm43846 3 104957442 to 104958373 931 - sense intronic lncRNA gene predicted gene 43846
Cpgi13654 3 104961087 to 104962654 1567 CpG island CpG island 13654
Tssr34909 3 104961668 to 104961686 18 - TSS region transcription start site region 34909
Tssr34910 3 104961695 to 104961728 33 - TSS region transcription start site region 34910
Tssr34911 3 104961734 to 104961745 11 - TSS region transcription start site region 34911
Cpgi13655 3 104967631 to 104968401 770 CpG island CpG island 13655
Gm46819 3 104981598 to 104986200 4602 + lncRNA gene predicted gene, 46819
Cpgi13656 3 104992720 to 104993069 349 CpG island CpG island 13656
Gm40117 3 104994032 to 105004005 9973 + antisense lncRNA gene predicted gene, 40117
Cttnbp2nl 3 105001915 to 105053146 51231 - protein coding gene CTTNBP2 N-terminal like