MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:104733389-104783717

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm6485	3	104752727 to 104753165	438	-	pseudogene	predicted gene 6485
Gm43584	3	104753123 to 104773270	20147	-	unclassified non-coding RNA gene	predicted gene 43584
Cpgi13648	3	104758389 to 104758717	328		CpG island	CpG island 13648
Tafa3	3	104767405 to 104779589	12184	-	protein coding gene	TAFA chemokine like family member 3
Tssr31049	3	104771734 to 104771742	8	+	TSS region	transcription start site region 31049
Tssr34886	3	104776249 to 104776251	2	-	TSS region	transcription start site region 34886
Tssr34887	3	104777231 to 104777235	4	-	TSS region	transcription start site region 34887
Cpgi13649	3	104777244 to 104777595	351		CpG island	CpG island 13649
Tssr34888	3	104777483 to 104777493	10	-	TSS region	transcription start site region 34888
Cpgi13650	3	104780804 to 104781931	1127		CpG island	CpG island 13650
Tssr31050	3	104780821 to 104780829	8	+	TSS region	transcription start site region 31050
Tssr34889	3	104780987 to 104781002	15	-	TSS region	transcription start site region 34889
Tssr31051	3	104781048 to 104781128	80	+	TSS region	transcription start site region 31051
Ppm1j	3	104781056 to 104786018	4962	+	protein coding gene	protein phosphatase 1J
Tssr31052	3	104781129 to 104781143	14	+	TSS region	transcription start site region 31052
Tssr31053	3	104782321 to 104782336	15	+	TSS region	transcription start site region 31053
Tssr31054	3	104782338 to 104782352	14	+	TSS region	transcription start site region 31054
Tssr31055	3	104782363 to 104782380	17	+	TSS region	transcription start site region 31055