Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:101292027-101562075

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm32803 3 101290998 to 101296608 5610 - lncRNA gene predicted gene, 32803
Tssr34786 3 101296555 to 101296566 11 - TSS region transcription start site region 34786
Tssr30898 3 101297481 to 101297506 25 + TSS region transcription start site region 30898
Tssr30899 3 101297523 to 101297536 13 + TSS region transcription start site region 30899
Tssr34787 3 101300197 to 101300206 9 - TSS region transcription start site region 34787
Tssr34788 3 101300234 to 101300239 5 - TSS region transcription start site region 34788
Gm10355 3 101306563 to 101307079 516 - pseudogene predicted gene 10355
Tssr30900 3 101310451 to 101310466 15 + TSS region transcription start site region 30900
Gm43467 3 101310846 to 101311282 436 + pseudogene predicted gene 43467
Gm32848 3 101315914 to 101321293 5379 + lncRNA gene predicted gene, 32848
Gm32900 3 101339626 to 101354606 14980 - lncRNA gene predicted gene, 32900
Cpgi13619 3 101376497 to 101377974 1477 CpG island CpG island 13619
Tssr30901 3 101376990 to 101377023 33 + TSS region transcription start site region 30901
Tssr30902 3 101377074 to 101377158 84 + TSS region transcription start site region 30902
Igsf3 3 101377114 to 101463060 85946 + protein coding gene immunoglobulin superfamily, member 3
D3Mit312 3 101400619 to 101400741 122 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology 312
Gm42939 3 101407793 to 101409997 2204 + sense intronic lncRNA gene predicted gene 42939
Gm42938 3 101411539 to 101412610 1071 + sense intronic lncRNA gene predicted gene 42938
Tssr987 3 101424122 to 101424125 3 + TSS region transcription start site region 987
Gm42538 3 101424615 to 101426936 2321 - antisense lncRNA gene predicted gene 42538
Tssr34789 3 101426958 to 101426975 17 - TSS region transcription start site region 34789
Tssr30903 3 101427027 to 101427075 48 + TSS region transcription start site region 30903
Tssr988 3 101428846 to 101428850 4 + TSS region transcription start site region 988
Tssr30904 3 101460614 to 101460624 10 + TSS region transcription start site region 30904
Tssr30905 3 101462069 to 101462092 23 + TSS region transcription start site region 30905
Gm40109 3 101501927 to 101507846 5919 - lncRNA gene predicted gene, 40109
Gm33162 3 101511555 to 101536250 24695 - lncRNA gene predicted gene, 33162
Tssr30906 3 101527046 to 101527056 10 + TSS region transcription start site region 30906
Tssr34790 3 101536435 to 101536446 11 - TSS region transcription start site region 34790
Tssr34791 3 101538940 to 101538941 1 - TSS region transcription start site region 34791