Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:71682815-71800397

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eae33 2 36101667 to 71779068 35677401 QTL experimental allergic encephalomyelitis susceptibility 33
Tssr18282 2 71719385 to 71719393 8 + TSS region transcription start site region 18282
Platr26 2 71719417 to 71730966 11549 + lincRNA gene pluripotency associated transcript 26
Gm13647 2 71737815 to 71745397 7582 + lincRNA gene predicted gene 13647
Tssr24495 2 71745740 to 71745772 32 - TSS region transcription start site region 24495
Tssr18283 2 71745824 to 71745861 37 + TSS region transcription start site region 18283
Gm13663 2 71747507 to 71750200 2693 + unclassified non-coding RNA gene predicted gene 13663
Gm17250 2 71748075 to 71750162 2087 - lincRNA gene predicted gene, 17250
Gm13662 2 71749925 to 71759801 9876 + unclassified non-coding RNA gene predicted gene 13662
Tssr24496 2 71750083 to 71750095 12 - TSS region transcription start site region 24496
Tssr24497 2 71750306 to 71750321 15 - TSS region transcription start site region 24497
Gm13739 2 71762238 to 71762767 529 - pseudogene predicted gene 13739
D2Mit11 2 71778844 to 71779068 224 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 11
Cpgi11750 2 71786525 to 71787960 1435 CpG island CpG island 11750
Itga6 2 71786886 to 71858427 71541 + protein coding gene integrin alpha 6
In(2Atf2-Itga6)58Ddu 2 71786886 to 73892639 2105753 chromosomal inversion inversion, Chr 2, Denis Duboule 58
In(2Hoxd11;Itga6)1Ddu 2 71786886 to 74687016 2900130 chromosomal inversion inversion, Chr 2, Denis Duboule 1
In(2Itga6-Evx2)44Ddu 2 71786886 to 74659557 2872671 chromosomal inversion inversion, Chr 2, Denis Duboule 44
In(2Lnp-Itga6)47Ddu 2 71786886 to 74579435 2792549 chromosomal inversion inversion, Chr 2, Denis Duboule 47
Tssr18284 2 71786898 to 71786908 10 + TSS region transcription start site region 18284
Tssr18285 2 71786923 to 71786945 22 + TSS region transcription start site region 18285
Tssr18286 2 71787014 to 71787045 31 + TSS region transcription start site region 18286
Tssr18287 2 71787057 to 71787083 26 + TSS region transcription start site region 18287
Tssr18288 2 71787098 to 71787107 9 + TSS region transcription start site region 18288
Tssr18289 2 71787115 to 71787133 18 + TSS region transcription start site region 18289
Tssr519 2 71787827 to 71787829 2 - TSS region transcription start site region 519