Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:69870815-70560822

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ssb 2 69861562 to 69871846 10284 + protein coding gene Sjogren syndrome antigen B
Mettl5 2 69871198 to 69885615 14417 - protein coding gene methyltransferase like 5
Gm13625 2 69871412 to 69872202 790 - unclassified non-coding RNA gene predicted gene 13625
Cpgi11720 2 69885233 to 69885989 756 CpG island CpG island 11720
Tssr24451 2 69885557 to 69885630 73 - TSS region transcription start site region 24451
Mettl5os 2 69885728 to 69888155 2427 + antisense lncRNA gene methyltransferase like 5, opposite strand
Cpgi11721 2 69897011 to 69898219 1208 CpG island CpG island 11721
Tssr18183 2 69897194 to 69897206 12 + TSS region transcription start site region 18183
Tssr18184 2 69897220 to 69897247 27 + TSS region transcription start site region 18184
Ubr3 2 69897246 to 70024013 126767 + protein coding gene ubiquitin protein ligase E3 component n-recognin 3
Tssr18185 2 69897255 to 69897294 39 + TSS region transcription start site region 18185
D2Mit349 2 69899905 to 69900035 130 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 349
D2Mit473 2 69899920 to 69900035 115 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 473
Tssr18186 2 69930528 to 69930536 8 + TSS region transcription start site region 18186
Gm13631 2 70038911 to 70042406 3495 + unclassified non-coding RNA gene predicted gene 13631
Tssr18187 2 70039114 to 70039125 11 + TSS region transcription start site region 18187
Myo3b 2 70039126 to 70429195 390069 + protein coding gene myosin IIIB
Tssr18188 2 70039267 to 70039306 39 + TSS region transcription start site region 18188
Tssr18189 2 70070033 to 70070076 43 + TSS region transcription start site region 18189
Tssr24452 2 70089714 to 70089736 22 - TSS region transcription start site region 24452
Tssr18190 2 70091926 to 70091931 5 + TSS region transcription start site region 18190
Tssr18191 2 70094971 to 70094984 13 + TSS region transcription start site region 18191
Tssr516 2 70135351 to 70135374 23 + TSS region transcription start site region 516
Tssr18192 2 70142970 to 70142975 5 + TSS region transcription start site region 18192
Tssr18193 2 70215815 to 70215822 7 + TSS region transcription start site region 18193
Gm46744 2 70408792 to 70427658 18866 - lncRNA gene predicted gene, 46744
D2Mit489.1 2 70413305 to 70413415 110 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 489.1
Tssr18194 2 70458945 to 70458956 11 + TSS region transcription start site region 18194
Rpl9-ps7 2 70458982 to 70459560 578 + pseudogene ribosomal protein L9, pseudogene 7
Cpgi11722 2 70471761 to 70472399 638 CpG island CpG island 11722
Cpgi11723 2 70473410 to 70474662 1252 CpG island CpG island 11723
Sp5 2 70474923 to 70477726 2803 + protein coding gene trans-acting transcription factor 5
Cpgi11724 2 70474980 to 70477383 2403 CpG island CpG island 11724
Tssr18195 2 70475111 to 70475127 16 + TSS region transcription start site region 18195
Tssr18196 2 70475955 to 70475969 14 + TSS region transcription start site region 18196
Tssr18197 2 70475983 to 70476004 21 + TSS region transcription start site region 18197
Tssr18198 2 70476051 to 70476092 41 + TSS region transcription start site region 18198
Tssr517 2 70476162 to 70476200 38 + TSS region transcription start site region 517
Gad1os 2 70489940 to 70563357 73417 - antisense lncRNA gene glutamate decarboxylase 1, opposite strand
Erich2os 2 70503433 to 70509199 5766 - antisense lncRNA gene glutamate rich 2, opposite strand
Tssr18199 2 70508662 to 70508680 18 + TSS region transcription start site region 18199
Tssr18200 2 70508697 to 70508706 9 + TSS region transcription start site region 18200
Tssr18201 2 70508813 to 70508824 11 + TSS region transcription start site region 18201
Erich2 2 70508819 to 70540884 32065 + protein coding gene glutamate rich 2
Cpgi11725 2 70508828 to 70509813 985 CpG island CpG island 11725
Tssr18202 2 70508832 to 70508839 7 + TSS region transcription start site region 18202
Tssr24453 2 70509206 to 70509219 13 - TSS region transcription start site region 24453
Tssr24454 2 70509267 to 70509293 26 - TSS region transcription start site region 24454
Tssr18203 2 70509344 to 70509382 38 + TSS region transcription start site region 18203
Tssr18204 2 70509421 to 70509470 49 + TSS region transcription start site region 18204
Tssr18205 2 70509490 to 70509502 12 + TSS region transcription start site region 18205
Gm37026 2 70523042 to 70523767 725 - unclassified gene predicted gene, 37026
Tssr18206 2 70533024 to 70533034 10 + TSS region transcription start site region 18206
Tssr18207 2 70533057 to 70533079 22 + TSS region transcription start site region 18207