Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:69241520-69741532

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Abcb11 2 69238282 to 69342616 104334 - protein coding gene ATP-binding cassette, sub-family B (MDR/TAP), member 11
Gm13613 2 69248307 to 69272491 24184 + antisense lncRNA gene predicted gene 13613
Gm13614 2 69329739 to 69330241 502 + pseudogene predicted gene 13614
Tssr24425 2 69342558 to 69342570 12 - TSS region transcription start site region 24425
Tssr24426 2 69342578 to 69342592 14 - TSS region transcription start site region 24426
Tssr24427 2 69342604 to 69342624 20 - TSS region transcription start site region 24427
Tssr18109 2 69355614 to 69355628 14 + TSS region transcription start site region 18109
Gm36393 2 69378851 to 69405782 26931 - lncRNA gene predicted gene, 36393
Tssr24428 2 69380306 to 69380317 11 - TSS region transcription start site region 24428
Tssr18110 2 69380431 to 69380458 27 + TSS region transcription start site region 18110
Dhrs9 2 69380462 to 69403086 22624 + protein coding gene dehydrogenase/reductase (SDR family) member 9
Tssr18111 2 69380468 to 69380478 10 + TSS region transcription start site region 18111
Tssr18112 2 69380481 to 69380503 22 + TSS region transcription start site region 18112
Cpgi11709 2 69380506 to 69380681 175 CpG island CpG island 11709
Tssr18113 2 69380533 to 69380542 9 + TSS region transcription start site region 18113
Tssr513 2 69381909 to 69381922 13 - TSS region transcription start site region 513
Tssr18114 2 69382028 to 69382035 7 + TSS region transcription start site region 18114
Tssr18115 2 69382050 to 69382057 7 + TSS region transcription start site region 18115
Tssr18116 2 69382101 to 69382108 7 + TSS region transcription start site region 18116
Tssr24429 2 69382985 to 69383004 19 - TSS region transcription start site region 24429
Tssr24430 2 69383034 to 69383046 12 - TSS region transcription start site region 24430
Mdq4 2 69387396 to 69387396 0 QTL mammary ductal QTL 4
Tssr18117 2 69392986 to 69392995 9 + TSS region transcription start site region 18117
Tssr18118 2 69393056 to 69393090 34 + TSS region transcription start site region 18118
Tssr18119 2 69393102 to 69393175 73 + TSS region transcription start site region 18119
Tssr18120 2 69394152 to 69394193 41 + TSS region transcription start site region 18120
Tssr18121 2 69394209 to 69394257 48 + TSS region transcription start site region 18121
Tssr18122 2 69394486 to 69394502 16 + TSS region transcription start site region 18122
Tssr18123 2 69403966 to 69404014 48 + TSS region transcription start site region 18123
Tssr24431 2 69405819 to 69405846 27 - TSS region transcription start site region 24431
Tssr24432 2 69405851 to 69405862 11 - TSS region transcription start site region 24432
Tssr18124 2 69412788 to 69412804 16 + TSS region transcription start site region 18124
Tssr24433 2 69414508 to 69414519 11 - TSS region transcription start site region 24433
Tssr24434 2 69414633 to 69414637 4 - TSS region transcription start site region 24434
Lrp2 2 69424340 to 69586065 161725 - protein coding gene low density lipoprotein receptor-related protein 2
Tssr24435 2 69453224 to 69453230 6 - TSS region transcription start site region 24435
D2Mit327 2 69465036 to 69465161 125 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 327
Tssr24436 2 69491520 to 69491532 12 - TSS region transcription start site region 24436
Tssr24437 2 69522639 to 69522647 8 - TSS region transcription start site region 24437
Tssr24438 2 69533596 to 69533604 8 - TSS region transcription start site region 24438
Tssr24439 2 69533637 to 69533648 11 - TSS region transcription start site region 24439
Tssr24440 2 69550906 to 69550924 18 - TSS region transcription start site region 24440
Tssr24441 2 69564919 to 69564922 3 - TSS region transcription start site region 24441
D2Mit524 2 69570569 to 69570665 96 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 524
Cpgi11710 2 69585203 to 69586506 1303 CpG island CpG island 11710
Tssr24442 2 69586021 to 69586037 16 - TSS region transcription start site region 24442
Cpgi11711 2 69587970 to 69588220 250 CpG island CpG island 11711
Hctq6 2 69617675 to 69617792 117 QTL hematocrit QTL 6
D2Mit380 2 69617675 to 69617792 117 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 380
Hbbcq3 2 69617675 to 69617792 117 QTL hemoglobin concentration QTL 3
Cpgi11712 2 69629233 to 69629507 274 CpG island CpG island 11712
Tssr18125 2 69646837 to 69646849 12 + TSS region transcription start site region 18125
Tssr18126 2 69646866 to 69646875 9 + TSS region transcription start site region 18126
Cpgi11713 2 69647030 to 69647619 589 CpG island CpG island 11713
Bbs5 2 69647171 to 69667571 20400 + protein coding gene Bardet-Biedl syndrome 5 (human)
Tssr18127 2 69647211 to 69647272 61 + TSS region transcription start site region 18127
Tssr18128 2 69669845 to 69669857 12 + TSS region transcription start site region 18128
Tssr18129 2 69669898 to 69669913 15 + TSS region transcription start site region 18129
Tssr18130 2 69670100 to 69670134 34 + TSS region transcription start site region 18130
Klhl41 2 69670120 to 69684230 14110 + protein coding gene kelch-like 41
Tssr18131 2 69670160 to 69670167 7 + TSS region transcription start site region 18131
Fastkd1 2 69686820 to 69712606 25786 - protein coding gene FAST kinase domains 1
Cpgi11714 2 69713051 to 69713703 652 CpG island CpG island 11714
Tssr24443 2 69713461 to 69713477 16 - TSS region transcription start site region 24443
Tssr24444 2 69713487 to 69713526 39 - TSS region transcription start site region 24444
Cpgi11715 2 69722593 to 69723744 1151 CpG island CpG island 11715
Tssr24445 2 69722747 to 69722783 36 - TSS region transcription start site region 24445
Tssr18132 2 69722797 to 69722840 43 + TSS region transcription start site region 18132
Ppig 2 69722819 to 69754059 31240 + protein coding gene peptidyl-prolyl isomerase G (cyclophilin G)
Tssr18133 2 69722860 to 69722876 16 + TSS region transcription start site region 18133
Tssr18134 2 69723039 to 69723068 29 + TSS region transcription start site region 18134
Tssr18135 2 69723071 to 69723093 22 + TSS region transcription start site region 18135
Tssr18136 2 69723248 to 69723278 30 + TSS region transcription start site region 18136
Gm13622 2 69737357 to 69737789 432 - pseudogene predicted gene 13622
Tssr24446 2 69737826 to 69737830 4 - TSS region transcription start site region 24446
Tssr18137 2 69741503 to 69741523 20 + TSS region transcription start site region 18137