Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:68387409-68777416

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stk39 2 68210445 to 68471981 261536 - protein coding gene serine/threonine kinase 39
Tssr24406 2 68389484 to 68389488 4 - TSS region transcription start site region 24406
Tssr24407 2 68409334 to 68409338 4 - TSS region transcription start site region 24407
Tssr24408 2 68415858 to 68415864 6 - TSS region transcription start site region 24408
Tssr18021 2 68421206 to 68421236 30 + TSS region transcription start site region 18021
Tssr24409 2 68426933 to 68426954 21 - TSS region transcription start site region 24409
Cpgi11706 2 68470812 to 68472658 1846 CpG island CpG island 11706
Tssr18022 2 68470844 to 68470855 11 + TSS region transcription start site region 18022
Tssr24410 2 68471878 to 68471911 33 - TSS region transcription start site region 24410
Tssr24411 2 68471925 to 68471944 19 - TSS region transcription start site region 24411
Tssr24412 2 68471945 to 68471994 49 - TSS region transcription start site region 24412
Tssr24413 2 68472002 to 68472118 116 - TSS region transcription start site region 24413
Tssr24414 2 68472120 to 68472137 17 - TSS region transcription start site region 24414
Tssr24415 2 68472138 to 68472145 7 - TSS region transcription start site region 24415
Tssr24416 2 68472279 to 68472317 38 - TSS region transcription start site region 24416
Gm13596 2 68476082 to 68477752 1670 + antisense lncRNA gene predicted gene 13596
Gm26321 2 68484143 to 68484384 241 + unclassified non-coding RNA gene predicted gene, 26321
Tssr18023 2 68554495 to 68554502 7 + TSS region transcription start site region 18023
Gm13597 2 68554555 to 68554929 374 + pseudogene predicted gene 13597
Tssr24417 2 68565375 to 68565387 12 - TSS region transcription start site region 24417
Tssr24418 2 68565394 to 68565398 4 - TSS region transcription start site region 24418
Tssr24419 2 68565403 to 68565417 14 - TSS region transcription start site region 24419
Tssr18024 2 68565657 to 68565676 19 + TSS region transcription start site region 18024
Gm49461 2 68566442 to 68574848 8406 + pseudogene predicted gene, 49461
Gm49462 2 68566992 to 68568555 1563 - lincRNA gene predicted gene, 49462
Tssr18025 2 68568562 to 68568571 9 + TSS region transcription start site region 18025
Tssr18026 2 68568577 to 68568584 7 + TSS region transcription start site region 18026
Tssr18027 2 68568592 to 68568649 57 + TSS region transcription start site region 18027
Gm36002 2 68578602 to 68582260 3658 - bidirectional promoter lncRNA gene predicted gene, 36002
Tssr24420 2 68582305 to 68582350 45 - TSS region transcription start site region 24420
Tssr18028 2 68582409 to 68582416 7 + TSS region transcription start site region 18028
4933409G03Rik 2 68582413 to 68616463 34050 + protein coding gene RIKEN cDNA 4933409G03 gene
Tssr18029 2 68582428 to 68582457 29 + TSS region transcription start site region 18029
4932414N04Rik 2 68656791 to 68748526 91735 + protein coding gene RIKEN cDNA 4932414N04 gene
Tssr18030 2 68726888 to 68726913 25 + TSS region transcription start site region 18030