Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:46170327-48920330

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm23072 2 46306336 to 46306458 122 + snoRNA gene predicted gene, 23072
Tssr23996 2 46360441 to 46360442 1 - TSS region transcription start site region 23996
D2Mit269 2 46365792 to 46365904 112 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 269
D2Mit375 2 46365816 to 46365904 88 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 375
Gm13469 2 46406220 to 46406569 349 - pseudogene predicted gene 13469
Gm13470 2 46419535 to 46442710 23175 - lincRNA gene predicted gene 13470
Tssr23997 2 46442681 to 46442713 32 - TSS region transcription start site region 23997
Tssr23998 2 46442866 to 46442880 14 - TSS region transcription start site region 23998
Tssr23999 2 46442899 to 46442914 15 - TSS region transcription start site region 23999
Tssr17649 2 46519977 to 46519980 3 + TSS region transcription start site region 17649
Gm25264 2 46606967 to 46607083 116 - snoRNA gene predicted gene, 25264
Gm25959 2 47541984 to 47542085 101 + miRNA gene predicted gene, 25959
Tssr17650 2 47545327 to 47545330 3 + TSS region transcription start site region 17650
D2Ucl22 2 47556844 to 47557198 354 DNA segment DNA segment, Chr 2, University College London 22
Tssr488 2 47742042 to 47742044 2 + TSS region transcription start site region 488
D2Mit470 2 47930038 to 47930281 243 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 470
Gm13481 2 48062162 to 48156559 94397 - lincRNA gene predicted gene 13481
Gm13471 2 48140146 to 48140578 432 + pseudogene predicted gene 13471
Gm13482 2 48298908 to 48299161 253 + pseudogene predicted gene 13482
Gm25338 2 48384219 to 48384338 119 - snRNA gene predicted gene, 25338
Gm13472 2 48388037 to 48388350 313 + pseudogene predicted gene 13472
Tssr24000 2 48457257 to 48457269 12 - TSS region transcription start site region 24000
Gm39809 2 48490606 to 48539147 48541 - lncRNA gene predicted gene, 39809
Tssr17651 2 48627462 to 48627470 8 + TSS region transcription start site region 17651
D2Mit298.2 2 48675962 to 48676110 148 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 298.2
Tssr489 2 48691503 to 48691510 7 - TSS region transcription start site region 489
Gm31324 2 48793307 to 48798903 5596 + lncRNA gene predicted gene, 31324
Gm13489 2 48809585 to 48810555 970 - pseudogene predicted gene 13489
Cpgi11635 2 48813389 to 48815052 1663 CpG island CpG island 11635
Tssr17652 2 48813998 to 48814013 15 + TSS region transcription start site region 17652
Tssr17653 2 48814016 to 48814040 24 + TSS region transcription start site region 17653
Acvr2a 2 48814109 to 48903264 89155 + protein coding gene activin receptor IIA
Tssr17654 2 48814124 to 48814173 49 + TSS region transcription start site region 17654
Tssr17655 2 48814176 to 48814219 43 + TSS region transcription start site region 17655
Tssr17656 2 48815343 to 48815352 9 + TSS region transcription start site region 17656
Tssr17657 2 48833305 to 48833312 7 + TSS region transcription start site region 17657
D2Mit240 2 48846927 to 48847046 119 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 240
Orc4 2 48902824 to 48950277 47453 - protein coding gene origin recognition complex, subunit 4
Tssr24001 2 48911924 to 48911940 16 - TSS region transcription start site region 24001
Tssr24002 2 48912263 to 48912277 14 - TSS region transcription start site region 24002