Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:39196743-41836839

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppp6c 2 39194369 to 39226338 31969 - protein coding gene protein phosphatase 6, catalytic subunit
Tssr23847 2 39196864 to 39196880 16 - TSS region transcription start site region 23847
Gm13511 2 39216932 to 39217294 362 - pseudogene predicted gene 13511
Cpgi11623 2 39225735 to 39226531 796 CpG island CpG island 11623
Tssr23848 2 39226071 to 39226118 47 - TSS region transcription start site region 23848
Tssr23849 2 39226244 to 39226263 19 - TSS region transcription start site region 23849
Tssr23850 2 39226272 to 39226332 60 - TSS region transcription start site region 23850
Tssr23851 2 39226343 to 39226354 11 - TSS region transcription start site region 23851
Tssr23852 2 39226419 to 39226426 7 - TSS region transcription start site region 23852
Tssr23853 2 39226445 to 39226456 11 - TSS region transcription start site region 23853
Gm13504 2 39237126 to 39237441 315 - pseudogene predicted gene 13504
Vmn2r-ps2 2 39274106 to 39274870 764 + pseudogene vomeronasal 2, receptor, pseudogene 2
Tssr17577 2 39295980 to 39295984 4 + TSS region transcription start site region 17577
Gm13506 2 39395413 to 39399730 4317 + pseudogene predicted gene 13506
Cpgi11624 2 39420721 to 39421077 356 CpG island CpG island 11624
Tssr23854 2 39421123 to 39421144 21 - TSS region transcription start site region 23854
D2Mit368 2 39481586 to 39481684 98 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 368
Gm13454 2 39524873 to 39525355 482 - pseudogene predicted gene 13454
Gm13451 2 39558157 to 39558733 576 - pseudogene predicted gene 13451
Gm13452 2 39574630 to 39575590 960 + pseudogene predicted gene 13452
Gm43944 2 39658852 to 39658971 119 - pseudogene predicted gene, 43944
Gm43970 2 39723995 to 39727599 3604 + unclassified gene predicted gene, 43970
Gm13453 2 40127504 to 40127860 356 - pseudogene predicted gene 13453
Gm13457 2 40177022 to 40177455 433 + pseudogene predicted gene 13457
Gm13458 2 40178266 to 40178632 366 - pseudogene predicted gene 13458
Gm13455 2 40287162 to 40287678 516 + pseudogene predicted gene 13455
Gm24467 2 40298517 to 40298642 125 + snoRNA gene predicted gene, 24467
Cpgi11625 2 40487114 to 40487324 210 CpG island CpG island 11625
D2Dcr132 2 40516743 to 40516839 96 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 132
Tssr17578 2 40555682 to 40555693 11 + TSS region transcription start site region 17578
Gm13456 2 40555752 to 40557116 1364 + pseudogene predicted gene 13456
Tssr17579 2 40556896 to 40556910 14 + TSS region transcription start site region 17579
Lrp1b 2 40595290 to 42653631 2058341 - protein coding gene low density lipoprotein-related protein 1B
Gm27348 2 40598374 to 40598543 169 - unclassified non-coding RNA gene predicted gene, 27348
D2Dcr133 2 40754094 to 40754189 95 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 133
Tubisq1 2 40799133 to 40799257 124 QTL tubulointerstitial injury severity, QTL 1
D2Mit369 2 40799133 to 40799257 124 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 369
D2Dcr49 2 40799136 to 40799271 135 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 49
D2Mit370 2 40799139 to 40799257 118 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 370
Tssr17580 2 40958329 to 40958335 6 + TSS region transcription start site region 17580
Gm13462 2 40958391 to 40959351 960 + pseudogene predicted gene 13462
D2Mit237 2 40995481 to 40995603 122 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 237
Gm13460 2 40998857 to 40999209 352 + pseudogene predicted gene 13460
Tssr23855 2 41081943 to 41081946 3 - TSS region transcription start site region 23855
D2Mit466 2 41225066 to 41225178 112 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 466
Gm30138 2 41292759 to 41340995 48236 + lncRNA gene predicted gene, 30138
D2Ucl4 2 41369511 to 41369723 212 DNA segment DNA segment, Chr 2, University College London 4
D2Dcr134 2 41384026 to 41384121 95 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 134
D2Mit371 2 41495188 to 41495306 118 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 371
D2Mit468 2 41551079 to 41551203 124 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 468
Dntcs2 2 115079684 to 40995481 -74084203 QTL dental caries susceptibility 2