MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:34469650-34709656

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mapkap1	2	34406771 to 34624950	218179	+	protein coding gene	mitogen-activated protein kinase associated protein 1
4930414H07Rik	2	34502625 to 34503441	816		unclassified gene	RIKEN cDNA 4930414H07 gene
Gm34178	2	34551556 to 34580470	28914	-	lncRNA gene	predicted gene, 34178
Tssr17406	2	34564970 to 34564977	7	+	TSS region	transcription start site region 17406
Gm13408	2	34564999 to 34565796	797	+	pseudogene	predicted gene 13408
Tssr17407	2	34589650 to 34589656	6	+	TSS region	transcription start site region 17407
Tssr17408	2	34608406 to 34608464	58	+	TSS region	transcription start site region 17408
1700007J24Rik	2	34608438 to 34609366	928		unclassified non-coding RNA gene	RIKEN cDNA 1700007J24 gene
Tssr17409	2	34608465 to 34608479	14	+	TSS region	transcription start site region 17409
Tssr17410	2	34608481 to 34608491	10	+	TSS region	transcription start site region 17410
Tssr17411	2	34608498 to 34608507	9	+	TSS region	transcription start site region 17411
Tssr17412	2	34608513 to 34608518	5	+	TSS region	transcription start site region 17412
Cpgi11553	2	34638998 to 34639615	617		CpG island	CpG island 11553
Gm34372	2	34639008 to 34651471	12463	+	lncRNA gene	predicted gene, 34372
Gm13414	2	34649514 to 34650240	726	-	pseudogene	predicted gene 13414
Cpgi11554	2	34671106 to 34672033	927		CpG island	CpG island 11554
Gapvd1	2	34676179 to 34755265	79086	-	protein coding gene	GTPase activating protein and VPS9 domains 1
Tssr23642	2	34692559 to 34692563	4	-	TSS region	transcription start site region 23642