Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:32543418-32713462

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam102a 2 32535359 to 32569750 34391 + protein coding gene family with sequence similarity 102, member A
Tssr17298 2 32565747 to 32565775 28 + TSS region transcription start site region 17298
Tssr23527 2 32567632 to 32567669 37 - TSS region transcription start site region 23527
Tssr17299 2 32567730 to 32567770 40 + TSS region transcription start site region 17299
Tssr23528 2 32567741 to 32567751 10 - TSS region transcription start site region 23528
Tssr17300 2 32567799 to 32567811 12 + TSS region transcription start site region 17300
Tssr17301 2 32567932 to 32567945 13 + TSS region transcription start site region 17301
Cpgi11513 2 32570699 to 32571274 575 CpG island CpG island 11513
Tssr17302 2 32570839 to 32570852 13 + TSS region transcription start site region 17302
Dpm2 2 32570858 to 32573571 2713 + protein coding gene dolichol-phosphate (beta-D) mannosyltransferase 2
Tssr17303 2 32570861 to 32570913 52 + TSS region transcription start site region 17303
Tssr17304 2 32572336 to 32572362 26 + TSS region transcription start site region 17304
9430097D07Rik 2 32574183 to 32575605 1422 - unclassified gene RIKEN cDNA 9430097D07 gene
Pip5kl1 2 32575163 to 32583782 8619 + protein coding gene phosphatidylinositol-4-phosphate 5-kinase-like 1
Cpgi11514 2 32575296 to 32576018 722 CpG island CpG island 11514
Tssr17305 2 32575836 to 32575848 12 + TSS region transcription start site region 17305
Tssr23529 2 32576260 to 32576265 5 - TSS region transcription start site region 23529
Tssr17306 2 32576399 to 32576403 4 + TSS region transcription start site region 17306
Cpgi11515 2 32583226 to 32583652 426 CpG island CpG island 11515
Cpgi11516 2 32586869 to 32587486 617 CpG island CpG island 11516
Tssr466 2 32587049 to 32587056 7 + TSS region transcription start site region 466
Tssr17307 2 32587057 to 32587123 66 + TSS region transcription start site region 17307
St6galnac4 2 32587095 to 32599698 12603 + protein coding gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
Tssr17308 2 32587159 to 32587176 17 + TSS region transcription start site region 17308
Tssr17309 2 32587280 to 32587310 30 + TSS region transcription start site region 17309
Gm23369 2 32593469 to 32593573 104 - snRNA gene predicted gene, 23369
Cpgi11517 2 32597004 to 32597281 277 CpG island CpG island 11517
Tssr17310 2 32599698 to 32599726 28 + TSS region transcription start site region 17310
St6galnac6 2 32599709 to 32620806 21097 + protein coding gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
Cpgi11518 2 32606748 to 32608385 1637 CpG island CpG island 11518
Tssr17311 2 32606946 to 32606973 27 + TSS region transcription start site region 17311
Tssr17312 2 32606979 to 32607057 78 + TSS region transcription start site region 17312
Tssr467 2 32608664 to 32608686 22 + TSS region transcription start site region 467
Tssr17313 2 32608704 to 32608717 13 + TSS region transcription start site region 17313
Tssr17314 2 32608985 to 32609033 48 + TSS region transcription start site region 17314
Tssr17315 2 32609047 to 32609084 37 + TSS region transcription start site region 17315
Cpgi11519 2 32612270 to 32612606 336 CpG island CpG island 11519
Cpgi11520 2 32615023 to 32615208 185 CpG island CpG island 11520
Tssr17316 2 32616171 to 32616174 3 + TSS region transcription start site region 17316
Tssr17317 2 32621529 to 32621553 24 + TSS region transcription start site region 17317
Tssr17318 2 32621750 to 32621774 24 + TSS region transcription start site region 17318
Ak1 2 32621758 to 32635058 13300 + protein coding gene adenylate kinase 1
Tssr17319 2 32621781 to 32621798 17 + TSS region transcription start site region 17319
Tssr17320 2 32625431 to 32625442 11 + TSS region transcription start site region 17320
Tssr17321 2 32625444 to 32625495 51 + TSS region transcription start site region 17321
Tssr17322 2 32626852 to 32626861 9 + TSS region transcription start site region 17322
Tssr17323 2 32626867 to 32626879 12 + TSS region transcription start site region 17323
Tssr17324 2 32628412 to 32628415 3 + TSS region transcription start site region 17324
Tssr17325 2 32628418 to 32628462 44 + TSS region transcription start site region 17325
Tssr17326 2 32629301 to 32629308 7 + TSS region transcription start site region 17326
Tssr17327 2 32629467 to 32629514 47 + TSS region transcription start site region 17327
Tssr17328 2 32629517 to 32629540 23 + TSS region transcription start site region 17328
Tssr17329 2 32629773 to 32629803 30 + TSS region transcription start site region 17329
Tssr17330 2 32629826 to 32629850 24 + TSS region transcription start site region 17330
Tssr17331 2 32630319 to 32630331 12 + TSS region transcription start site region 17331
Tssr17332 2 32633720 to 32633746 26 + TSS region transcription start site region 17332
Tssr17333 2 32634203 to 32634218 15 + TSS region transcription start site region 17333
Tssr17334 2 32646531 to 32646541 10 + TSS region transcription start site region 17334
Tssr17335 2 32646586 to 32646602 16 + TSS region transcription start site region 17335
Eng 2 32646595 to 32682669 36074 + protein coding gene endoglin
Tssr17336 2 32646604 to 32646609 5 + TSS region transcription start site region 17336
Tssr17337 2 32646617 to 32646633 16 + TSS region transcription start site region 17337
Tssr17338 2 32646639 to 32646674 35 + TSS region transcription start site region 17338
Cpgi11521 2 32646734 to 32647001 267 CpG island CpG island 11521
Mir1954 2 32652329 to 32652414 85 + miRNA gene microRNA 1954
Tssr17339 2 32657498 to 32657509 11 + TSS region transcription start site region 17339
Tssr17340 2 32657600 to 32657613 13 + TSS region transcription start site region 17340
Gm47291 2 32675108 to 32675172 64 + miRNA gene predicted gene, 47291
Gm26236 2 32675109 to 32675245 136 + snoRNA gene predicted gene, 26236
D2Mit366 2 32677053 to 32677144 91 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 366
Tssr17341 2 32680266 to 32680300 34 + TSS region transcription start site region 17341
Fpgs 2 32682609 to 32704145 21536 - protein coding gene folylpolyglutamyl synthetase
Mir8093 2 32687630 to 32687766 136 - miRNA gene microRNA 8093
Cpgi11522 2 32693612 to 32694365 753 CpG island CpG island 11522
Tssr23530 2 32694099 to 32694106 7 - TSS region transcription start site region 23530
Tssr23531 2 32694120 to 32694176 56 - TSS region transcription start site region 23531
Tssr23532 2 32704123 to 32704139 16 - TSS region transcription start site region 23532
Tssr23533 2 32704144 to 32704157 13 - TSS region transcription start site region 23533
Cdk9 2 32705782 to 32712784 7002 - protein coding gene cyclin-dependent kinase 9 (CDC2-related kinase)
Cpgi11523 2 32711999 to 32713870 1871 CpG island CpG island 11523
Tssr23534 2 32712234 to 32712276 42 - TSS region transcription start site region 23534
Tssr23535 2 32712728 to 32712793 65 - TSS region transcription start site region 23535
Mir2861 2 32712807 to 32712888 81 - miRNA gene microRNA 2861
Mir3960 2 32712900 to 32712972 72 - miRNA gene microRNA 3960
Tssr23536 2 32713042 to 32713062 20 - TSS region transcription start site region 23536
Tssr23537 2 32713065 to 32713091 26 - TSS region transcription start site region 23537
Tssr23538 2 32713220 to 32713251 31 - TSS region transcription start site region 23538