Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:31089470-31331347

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fnbp1 2 31026206 to 31142008 115802 - protein coding gene formin binding protein 1
Tssr23428 2 31100985 to 31100995 10 - TSS region transcription start site region 23428
Tssr23429 2 31116289 to 31116320 31 - TSS region transcription start site region 23429
Tssr17169 2 31140280 to 31140286 6 + TSS region transcription start site region 17169
Cpgi11465 2 31140924 to 31142523 1599 CpG island CpG island 11465
Tssr23430 2 31141943 to 31142001 58 - TSS region transcription start site region 23430
Tssr23431 2 31142002 to 31142017 15 - TSS region transcription start site region 23431
Tssr23432 2 31142019 to 31142028 9 - TSS region transcription start site region 23432
Tssr17170 2 31143412 to 31143443 31 + TSS region transcription start site region 17170
D330023K18Rik 2 31151049 to 31152291 1242 - lncRNA gene RIKEN cDNA D330023K18 gene
Cpgi11466 2 31152000 to 31152789 789 CpG island CpG island 11466
Tssr23433 2 31152234 to 31152284 50 - TSS region transcription start site region 23433
Gpr107 2 31152316 to 31216567 64251 + protein coding gene G protein-coupled receptor 107
Tssr17171 2 31152318 to 31152360 42 + TSS region transcription start site region 17171
Tssr23434 2 31153166 to 31153172 6 - TSS region transcription start site region 23434
Tssr23435 2 31163526 to 31163542 16 - TSS region transcription start site region 23435
Tssr23436 2 31163563 to 31163571 8 - TSS region transcription start site region 23436
Tssr17172 2 31171949 to 31171963 14 + TSS region transcription start site region 17172
Gm22516 2 31189691 to 31189814 123 + snoRNA gene predicted gene, 22516
Gm13405 2 31209470 to 31211347 1877 - antisense lncRNA gene predicted gene 13405
Cpgi11467 2 31239201 to 31239663 462 CpG island CpG island 11467
Tssr23437 2 31239481 to 31239486 5 - TSS region transcription start site region 23437
Cpgi11468 2 31245177 to 31247001 1824 CpG island CpG island 11468
Tssr17173 2 31245801 to 31245900 99 + TSS region transcription start site region 17173
Ncs1 2 31245823 to 31295989 50166 + protein coding gene neuronal calcium sensor 1
Tssr17174 2 31245905 to 31245916 11 + TSS region transcription start site region 17174
Tssr17175 2 31246042 to 31246055 13 + TSS region transcription start site region 17175
Tssr17176 2 31246069 to 31246120 51 + TSS region transcription start site region 17176
Tssr17177 2 31278033 to 31278044 11 + TSS region transcription start site region 17177
Tssr17178 2 31284144 to 31284157 13 + TSS region transcription start site region 17178
Tssr17179 2 31293185 to 31293194 9 + TSS region transcription start site region 17179
Gm32866 2 31307613 to 31314488 6875 - lncRNA gene predicted gene, 32866
Cfq6 2 31313023 to 44618192 13305169 QTL conditioned fear QTL 6
Cpgi11469 2 31313962 to 31315034 1072 CpG island CpG island 11469
Tssr17180 2 31314278 to 31314287 9 + TSS region transcription start site region 17180
Tssr17181 2 31314303 to 31314376 73 + TSS region transcription start site region 17181
Hmcn2 2 31314415 to 31460738 146323 + protein coding gene hemicentin 2
D2Mit296 2 31324555 to 31324701 146 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 296
Sbmd2 2 31324555 to 31324701 146 QTL spinal bone mineral density 2
Hbnr5 2 105313225 to 31324555 -73988670 QTL Heligmosomoides bakeri nematode resistance 5