Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:30402631-30544199

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Crat 2 30400476 to 30415748 15272 - protein coding gene carnitine acetyltransferase
Tssr23367 2 30406402 to 30406415 13 - TSS region transcription start site region 23367
Tssr23368 2 30413270 to 30413299 29 - TSS region transcription start site region 23368
Gm16323 2 30413716 to 30415338 1622 + antisense lncRNA gene predicted gene 16323
Tssr23369 2 30414104 to 30414118 14 - TSS region transcription start site region 23369
Tssr23370 2 30414169 to 30414180 11 - TSS region transcription start site region 23370
Cpgi11436 2 30415091 to 30416679 1588 CpG island CpG island 11436
Tssr23371 2 30415302 to 30415368 66 - TSS region transcription start site region 23371
Tssr23372 2 30415389 to 30415410 21 - TSS region transcription start site region 23372
Tssr23373 2 30415418 to 30415429 11 - TSS region transcription start site region 23373
Tssr23374 2 30415438 to 30415449 11 - TSS region transcription start site region 23374
Tssr23375 2 30415460 to 30415505 45 - TSS region transcription start site region 23375
Tssr23376 2 30415509 to 30415560 51 - TSS region transcription start site region 23376
Tssr23377 2 30415572 to 30415612 40 - TSS region transcription start site region 23377
Tssr23378 2 30415614 to 30415624 10 - TSS region transcription start site region 23378
Tssr17115 2 30415618 to 30415683 65 + TSS region transcription start site region 17115
Tssr23379 2 30415634 to 30415708 74 - TSS region transcription start site region 23379
Tssr23380 2 30415767 to 30415774 7 - TSS region transcription start site region 23380
Tssr23381 2 30416003 to 30416045 42 - TSS region transcription start site region 23381
Tssr17116 2 30416031 to 30416077 46 + TSS region transcription start site region 17116
Ptpa 2 30416050 to 30447807 31757 + protein coding gene protein phosphatase 2 protein activator
Tssr17117 2 30416080 to 30416090 10 + TSS region transcription start site region 17117
Tssr17118 2 30416096 to 30416147 51 + TSS region transcription start site region 17118
Tssr17119 2 30416187 to 30416221 34 + TSS region transcription start site region 17119
Tssr17120 2 30430042 to 30430047 5 + TSS region transcription start site region 17120
Tssr17121 2 30439507 to 30439534 27 + TSS region transcription start site region 17121
Tssr17122 2 30441831 to 30441836 5 + TSS region transcription start site region 17122
Tssr17123 2 30441919 to 30441949 30 + TSS region transcription start site region 17123
Tssr17124 2 30441978 to 30442004 26 + TSS region transcription start site region 17124
Tssr17125 2 30442063 to 30442078 15 + TSS region transcription start site region 17125
Tssr17126 2 30445634 to 30445647 13 + TSS region transcription start site region 17126
Tssr17127 2 30466379 to 30466384 5 + TSS region transcription start site region 17127
Tssr458 2 30469220 to 30469222 2 - TSS region transcription start site region 458
Cpgi11437 2 30469670 to 30470901 1231 CpG island CpG island 11437
Cpgi11438 2 30472332 to 30474845 2513 CpG island CpG island 11438
Ier5l 2 30472631 to 30474199 1568 - protein coding gene immediate early response 5-like
Tssr23382 2 30473474 to 30473521 47 - TSS region transcription start site region 23382
Tssr23383 2 30474212 to 30474222 10 - TSS region transcription start site region 23383
Gm31291 2 30475447 to 30489052 13605 + lncRNA gene predicted gene, 31291
Gm39781 2 30497826 to 30502128 4302 + lncRNA gene predicted gene, 39781
Gm14487 2 30534729 to 30539022 4293 + lincRNA gene predicted gene 14487