MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:29629787-29769808

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rapgef1	2	29619720 to 29740364	120644	+	protein coding gene	Rap guanine nucleotide exchange factor (GEF) 1
Tssr17008	2	29643665 to 29643681	16	+	TSS region	transcription start site region 17008
Tssr17009	2	29643698 to 29643712	14	+	TSS region	transcription start site region 17009
Tssr17010	2	29643738 to 29643757	19	+	TSS region	transcription start site region 17010
Tssr17011	2	29643763 to 29643782	19	+	TSS region	transcription start site region 17011
Tssr17012	2	29643788 to 29643805	17	+	TSS region	transcription start site region 17012
Tssr17013	2	29699787 to 29699808	21	+	TSS region	transcription start site region 17013
Tssr17014	2	29724027 to 29724029	2	+	TSS region	transcription start site region 17014
Gm9823	2	29738335 to 29738665	330	-	pseudogene	predicted gene 9823
Tssr23327	2	29744645 to 29744649	4	-	TSS region	transcription start site region 23327
Gm13420	2	29744919 to 29751685	6766	-	protein coding gene	predicted gene 13420
Cpgi11410	2	29747064 to 29747760	696		CpG island	CpG island 11410
Cpgi11411	2	29751131 to 29751919	788		CpG island	CpG island 11411
Tssr23328	2	29751635 to 29751669	34	-	TSS region	transcription start site region 23328
Trub2	2	29761223 to 29787708	26485	-	protein coding gene	TruB pseudouridine (psi) synthase family member 2
Gm13547	2	29761528 to 29764089	2561	+	protein coding gene	predicted gene 13547
Tssr17015	2	29761555 to 29761567	12	+	TSS region	transcription start site region 17015
Tssr17016	2	29761606 to 29761611	5	+	TSS region	transcription start site region 17016